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🧬AP Biology
Key Terms

1252 essential vocabulary terms and definitions to know for your AP Biology exam

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🧬AP Biology
Key Terms by Unit

🧪Unit 1 – Chemistry of Life

1.1 Structure of Water and Hydrogen Bonding

TermDefinition
adhesionThe attractive force between water molecules and other polar substances, allowing water to stick to different surfaces.
cohesionThe attractive force between water molecules that causes them to stick together, resulting from hydrogen bonding.
evaporative coolingThe process by which the evaporation of water removes heat from an organism or environment.
heat of vaporizationThe energy required to convert a liquid to a gas, enabling water to remove heat from organisms through evaporative cooling.
homeostasisThe maintenance of stable internal environmental conditions in an organism despite external and internal changes.
hydrogen bondWeak attractive forces between a hydrogen atom bonded to an electronegative atom and another electronegative atom, occurring between or within biological molecules.
polar covalent bondsChemical bonds between atoms where electrons are unequally shared, resulting in partial positive and negative charges.
polarityThe unequal distribution of electrical charge in a molecule, resulting in one end being partially positive and the other partially negative.
specific heat capacityThe amount of energy required to raise the temperature of a substance by one degree, allowing water to resist rapid temperature changes.
surface tensionThe property of water that allows its surface to resist breaking, resulting from hydrogen bonding between adjacent water molecules.

1.2 Elements of Life

TermDefinition
carbohydratesBiological molecules composed of carbon, hydrogen, and oxygen that serve as a primary source of energy and structural support in living organisms.
carbonAn element that is the most prevalent component of biological molecules and forms the backbone of all organic compounds.
hydrogenAn element that is a prevalent component of biological molecules and is bonded to carbon, oxygen, and nitrogen in macromolecules.
lipidHydrophobic or amphipathic biological molecules composed primarily of carbon, hydrogen, and oxygen that store energy and form cell membranes.
macromoleculesLarge, complex molecules composed of many atoms that are essential for life processes, including carbohydrates, proteins, lipids, and nucleic acids.
nitrogenAn element used in the building of nucleic acids and proteins as part of amino groups and nitrogenous bases.
nucleic acidMacromolecules composed of nucleotides containing carbon, hydrogen, oxygen, nitrogen, and phosphorus that store and transmit genetic information.
oxygenAn element that is a prevalent component of biological molecules and is found in carbohydrates, lipids, proteins, and nucleic acids.
phospholipidAmphipathic molecules with hydrophilic phosphate heads and hydrophobic fatty acid tails that form the basic structure of the cell membrane.
phosphorusAn element used in the building of phospholipids and nucleic acids, particularly in phosphate groups.
proteinMacromolecules composed of amino acids linked together, containing carbon, hydrogen, oxygen, nitrogen, and often sulfur, that perform diverse functions in cells.
sulfurAn element used in the building of proteins, often found in disulfide bonds between amino acids.

1.3 Introduction to Biological Macromolecules

TermDefinition
covalent bondChemical bonds formed by the sharing of electrons between atoms, which can be broken or formed during macromolecule reactions.
dehydration synthesisA chemical reaction that joins two smaller molecules together through covalent bonding by removing water, resulting in the formation of a larger molecule.
hydrolysisA chemical reaction that breaks down molecules by cleaving covalent bonds through the addition of water, splitting polymers into smaller monomers.
monomerSmall individual molecules that serve as the building blocks for larger polymers.
polymerA large molecule composed of many monomers linked together through covalent bonds.
polymerizationThe process by which many monomers are connected together to form a polymer.

1.4 Properties of Biological Macromolecules

TermDefinition
celluloseA polysaccharide polymer composed of glucose monomers that provides structural support in plant cell walls.
covalent bondChemical bonds formed by the sharing of electrons between atoms, which can be broken or formed during macromolecule reactions.
glycogenA polysaccharide polymer that serves as an energy storage molecule in animals.
monomerSmall individual molecules that serve as the building blocks for larger polymers.
monosaccharidesSimple sugars that serve as monomers (building blocks) for polysaccharides and carbohydrates.
polymerA large molecule composed of many monomers linked together through covalent bonds.
polysaccharidesComplex carbohydrates formed by linking many monosaccharide monomers together through covalent bonds.
starchA polysaccharide polymer that serves as an energy storage molecule in plants.

1.5 Structure and Function of Biological Macromolecules

TermDefinition
cholesterolA steroid molecule found in the plasma membranes of vertebrate animals that regulates membrane fluidity and stability.
fatsLipids composed of glycerol and fatty acids that provide energy storage, support cell function, and can provide insulation in mammals.
fatty acidOrganic compounds consisting of a carboxyl group attached to a long hydrocarbon chain; can be saturated or unsaturated.
hydrophobicWater-repelling; referring to nonpolar molecules or regions that do not interact favorably with water.
lipidHydrophobic or amphipathic biological molecules composed primarily of carbon, hydrogen, and oxygen that store energy and form cell membranes.
lipid bilayerA double layer of phospholipids that forms the basic structure of cell membranes and plasma membranes.
nonpolarReferring to molecules or groups with even distribution of electrical charge, making them hydrophobic.
phospholipidAmphipathic molecules with hydrophilic phosphate heads and hydrophobic fatty acid tails that form the basic structure of the cell membrane.
plasma membraneThe selectively permeable membrane that surrounds the cell, composed of phospholipids, proteins, and other molecules that regulate what enters and exits the cell.
saturated fatty acidFatty acids that contain only single bonds between carbon atoms.
steroidLipids with a four-ring carbon structure that function as hormones supporting growth, development, energy metabolism, and homeostasis.
unsaturated fatty acidFatty acids that contain at least one double bond between carbon atoms, causing the carbon chain to kink.

1.6 Nucleic Acids

TermDefinition
3' endThe end of a nucleic acid strand defined by the three prime hydroxyl group of the sugar.
5' endThe end of a nucleic acid strand defined by the five prime phosphate group of the sugar.
adenineA purine nitrogenous base found in both DNA and RNA that pairs with thymine in DNA or uracil in RNA.
antiparallelThe orientation of the two DNA strands running in opposite directions, with one strand oriented 5' to 3' and the other 3' to 5'.
base pairingThe specific pairing of nitrogenous bases between DNA strands (A-T and C-G) or in RNA (A-U).
covalent bondChemical bonds formed by the sharing of electrons between atoms, which can be broken or formed during macromolecule reactions.
cytosineA pyrimidine nitrogenous base found in both DNA and RNA that pairs with guanine.
deoxyriboseA five-carbon sugar found in DNA nucleotides.
DNADeoxyribonucleic acid; a double-stranded nucleic acid that stores genetic information using deoxyribose sugar and thymine as a nitrogenous base.
double helixThe three-dimensional structure of DNA consisting of two antiparallel strands twisted around each other.
guanineA purine nitrogenous base found in both DNA and RNA that pairs with cytosine.
hydrogen bondWeak attractive forces between a hydrogen atom bonded to an electronegative atom and another electronegative atom, occurring between or within biological molecules.
nitrogenous baseA nitrogen-containing molecule that is part of a nucleotide; includes adenine, thymine, guanine, cytosine, and uracil.
nucleic acidMacromolecules composed of nucleotides containing carbon, hydrogen, oxygen, nitrogen, and phosphorus that store and transmit genetic information.
nucleotideThe monomer unit of nucleic acids, consisting of a five-carbon sugar, a phosphate group, and a nitrogenous base.
phosphateA chemical group that is part of the nucleotide structure and forms covalent bonds between nucleotides in a nucleic acid strand.
riboseA five-carbon sugar found in RNA nucleotides.
RNARibonucleic acid; typically a single-stranded nucleic acid that uses ribose sugar and uracil as a nitrogenous base.
thymineA pyrimidine nitrogenous base found in DNA that pairs with adenine.
uracilA pyrimidine nitrogenous base found in RNA that pairs with adenine.

1.7 Multiple Choice Questions

TermDefinition
alpha-helixA coiled secondary structure of a protein formed by hydrogen bonding between backbone atoms of the polypeptide chain.
amino acidOrganic molecules that serve as the building blocks of proteins, each composed of a central carbon atom bonded to a hydrogen atom, a carboxyl group, an amine group, and a variable R group.
beta-pleated sheetAn extended secondary structure of a protein formed by hydrogen bonding between backbone atoms of the polypeptide chain, creating a zigzag pattern.
disulfide bridgeCovalent bonds formed between sulfur atoms in cysteine R groups that stabilize tertiary protein structure.
hydrogen bondWeak attractive forces between a hydrogen atom bonded to an electronegative atom and another electronegative atom, occurring between or within biological molecules.
hydrophobic interactionInteractions between nonpolar R groups that cluster together in the interior of a protein to avoid contact with water, contributing to tertiary structure.
ionic interactionElectrostatic attractions between oppositely charged R groups that stabilize tertiary protein structure.
peptide bondCovalent bonds formed between the carboxyl group of one amino acid and the amine group of another amino acid, linking amino acids together in a protein chain.
polypeptideA chain of amino acids linked together by peptide bonds.
primary structureThe linear sequence of amino acids in a polypeptide chain, determined by the specific order of amino acids in the protein.
quaternary structureThe arrangement and interactions of multiple polypeptide chains within a protein complex.
R groupThe variable side chain of an amino acid that determines its chemical properties (hydrophobic/nonpolar, hydrophilic/polar, or ionic) and influences protein structure and function.
secondary structureLocal folding patterns in a protein formed by hydrogen bonding between atoms of the polypeptide backbone, including alpha-helices and beta-pleated sheets.
tertiary structureThe three-dimensional shape of a protein resulting from interactions such as hydrogen bonds, hydrophobic interactions, ionic interactions, and disulfide bridges between R groups.

🧬Unit 2 – Cell Structure and Function

2.10 Cell Compartmentalization

TermDefinition
chloroplastsSpecialized organelles found in plants and photosynthetic algae that contain a double membrane and serve as the location for photosynthesis.
compartmentalizationThe division of the eukaryotic cell into distinct membrane-bound regions that separate different metabolic processes and enzymatic reactions.
endosymbiosisThe process by which free-living prokaryotic cells were engulfed by larger cells and became membrane-bound organelles.
eukaryotic cellCells that contain a membrane-bound nucleus and internal membrane-bound organelles, found in animals, plants, fungi, and protists.
internal membraneMembranes within eukaryotic cells that divide the cell into compartments with specialized functions.
membrane-bound organelleSpecialized structures within eukaryotic cells enclosed by a membrane that perform specific cellular functions.
mitochondriaMembrane-bound organelles in eukaryotic cells that are the primary site of aerobic cellular respiration and ATP synthesis.
prokaryotic cellCells that lack a membrane-bound nucleus and internal membrane-bound organelles, typically bacteria and archaea.

2.1 Cell Structure

TermDefinition
adenosine triphosphateThe primary energy currency of cells that powers cellular functions.
aerobic cellular respirationThe metabolic pathway that uses oxygen as the terminal electron acceptor to generate ATP from biological macromolecules.
chemical modificationChanges made to proteins in the Golgi that affect their function or cellular location.
chloroplastsSpecialized organelles found in plants and photosynthetic algae that contain a double membrane and serve as the location for photosynthesis.
double membraneTwo layers of membrane found in mitochondria and chloroplasts that create separate compartments for different cellular processes.
endomembrane systemA group of membrane-bound organelles and subcellular components that work together to modify, package, and transport polysaccharides, lipids, and proteins within cells.
endoplasmic reticulum (ER)A membrane-bound organelle that provides mechanical support, maintains cell shape, and plays a role in intracellular transport.
glycosylationA chemical modification of proteins that takes place within the Golgi and determines protein function or targeting.
Golgi complexA membrane-bound organelle consisting of flattened membrane sacs that folds and chemically modifies newly synthesized proteins and packages them for trafficking.
hydrolytic enzymeEnzymes found in lysosomes that break down and digest cellular materials.
intracellular transportThe movement of materials within a cell, facilitated by organelles like the endoplasmic reticulum.
lipidHydrophobic or amphipathic biological molecules composed primarily of carbon, hydrogen, and oxygen that store energy and form cell membranes.
lipid synthesisThe production of lipids, a function carried out by smooth endoplasmic reticulum.
lysosomesMembrane-enclosed sacs that contain hydrolytic enzymes for digesting material and play a role in programmed cell death.
mitochondriaMembrane-bound organelles in eukaryotic cells that are the primary site of aerobic cellular respiration and ATP synthesis.
nuclear envelopeA membrane-bound component of the endomembrane system that surrounds the nucleus.
organelleMembrane-bound or non-membrane-bound structures within eukaryotic cells that perform specific cellular functions.
photosynthesisThe series of reactions that use carbon dioxide, water, and light energy to produce carbohydrates and oxygen, allowing organisms to capture and store energy from the sun.
plasma membraneThe selectively permeable membrane that surrounds the cell, composed of phospholipids, proteins, and other molecules that regulate what enters and exits the cell.
polysaccharidesComplex carbohydrates formed by linking many monosaccharide monomers together through covalent bonds.
programmed cell deathProgrammed cell death, a controlled process in which a cell actively participates in its own destruction.
proteinMacromolecules composed of amino acids linked together, containing carbon, hydrogen, oxygen, nitrogen, and often sulfur, that perform diverse functions in cells.
protein synthesisThe process by which ribosomes build proteins according to mRNA sequences.
ribosomesNon-membrane subcellular structures composed of ribosomal RNA and protein that synthesize proteins according to messenger RNA sequences.
rough endoplasmic reticulumEndoplasmic reticulum with attached ribosomes on its cytoplasmic surface; site of synthesis for proteins destined for secretion or membrane insertion.
smooth endoplasmic reticulumEndoplasmic reticulum that functions in the detoxification of cells and lipid synthesis.
subcellular componentStructures within a cell that perform specific functions, including both membrane-bound organelles and non-membrane structures.
transport vesicleMembrane-bound structures that are part of the endomembrane system and transport materials between organelles.
turgor pressureThe pressure maintained in plant cells by a large vacuole through nutrient and water storage.
vacuoleMembrane-bound sacs that store cellular materials and play various roles in plant and animal cells.

2.2 Cell Structure and Function

TermDefinition
heat exchangeThe transfer of thermal energy between an organism's body and the surrounding environment; rate decreases as organism size increases.
membrane foldsInfoldings of the cell membrane that increase surface area to facilitate more efficient material exchange in complex cells.
metabolic rateThe rate at which an organism uses energy; typically higher per unit body mass in smaller organisms than in larger organisms.
nutrient exchangeThe process by which cells obtain necessary nutrients from the environment.
plasma membraneThe selectively permeable membrane that surrounds the cell, composed of phospholipids, proteins, and other molecules that regulate what enters and exits the cell.
surface area-to-volume ratioThe relationship between the total surface area and the total volume of a cell or organism; affects the efficiency of material exchange with the environment.
thermal energy exchangeThe transfer of heat energy between an organism and its environment.
waste productsByproducts of cellular metabolism that must be eliminated from cells or organisms.

2.3 Cell Size

TermDefinition
cholesterolA steroid molecule found in the plasma membranes of vertebrate animals that regulates membrane fluidity and stability.
cytosolThe aqueous interior of the cell where hydrophilic protein regions may be exposed.
embedded proteinProteins that are integrated into or span across the phospholipid bilayer of the cell membrane.
fatty acidOrganic compounds consisting of a carboxyl group attached to a long hydrocarbon chain; can be saturated or unsaturated.
fluid mosaic modelA model describing the plasma membrane as a flexible structure composed of a phospholipid bilayer with embedded and peripheral proteins that can move laterally within the membrane.
glycolipidA lipid with carbohydrate chains attached, found in the plasma membrane and involved in cell recognition.
glycoproteinA protein with carbohydrate chains attached, found in the plasma membrane and involved in cell recognition and signaling.
hydrophilicWater-loving; referring to polar molecules or regions that interact favorably with water.
hydrophobicWater-repelling; referring to nonpolar molecules or regions that do not interact favorably with water.
nonpolarReferring to molecules or groups with even distribution of electrical charge, making them hydrophobic.
phosphateA chemical group that is part of the nucleotide structure and forms covalent bonds between nucleotides in a nucleic acid strand.
phospholipidAmphipathic molecules with hydrophilic phosphate heads and hydrophobic fatty acid tails that form the basic structure of the cell membrane.
plasma membraneThe selectively permeable membrane that surrounds the cell, composed of phospholipids, proteins, and other molecules that regulate what enters and exits the cell.
polarReferring to molecules or groups with uneven distribution of electrical charge, making them hydrophilic.
proteinMacromolecules composed of amino acids linked together, containing carbon, hydrogen, oxygen, nitrogen, and often sulfur, that perform diverse functions in cells.
steroidLipids with a four-ring carbon structure that function as hormones supporting growth, development, energy metabolism, and homeostasis.

2.4 Plasma Membranes

TermDefinition
cell wallA rigid structural layer outside the cell membrane that provides support, maintains cell shape, and acts as a permeability barrier in bacteria, archaea, fungi, and plants.
hydrocarbon tailThe nonpolar, hydrophobic portions of phospholipids that form the interior of the membrane and prevent ion and polar molecule movement.
hydrophilic substanceWater-loving polar molecules and ions that cannot easily cross the hydrophobic membrane interior and require transport proteins or channels.
hydrophobic interiorThe nonpolar region in the middle of the phospholipid bilayer that repels water and polar molecules.
ionCharged particles that cannot freely cross the hydrophobic membrane interior and require transport proteins or channels for movement.
nonpolar moleculeMolecules that lack a net electric charge and can pass freely across the hydrophobic interior of the membrane.
osmotic lysisThe rupture of a cell membrane due to water entering the cell in a hypotonic environment; prevented by the cell wall in plant cells, bacteria, archaea, and fungi.
permeability barrierA selective barrier that controls which substances can pass between the internal and external cellular environments.
phospholipidAmphipathic molecules with hydrophilic phosphate heads and hydrophobic fatty acid tails that form the basic structure of the cell membrane.
plasma membraneThe selectively permeable membrane that surrounds the cell, composed of phospholipids, proteins, and other molecules that regulate what enters and exits the cell.
polar moleculeMolecules with uneven distribution of electrical charge that generally cannot cross the hydrophobic membrane interior without assistance.
selective permeabilityThe property of a membrane that allows certain substances to pass through while restricting the passage of others.
structural boundaryThe physical barrier provided by the cell wall that defines and maintains the shape and integrity of the cell.
transport proteinEmbedded membrane proteins that facilitate the movement of hydrophilic substances across the membrane.

2.5 Membrane Permeability

TermDefinition
active transportThe movement of ions and molecules across a membrane against their concentration gradient, requiring metabolic energy from ATP.
concentration gradientA difference in the concentration of a substance across a membrane, with higher concentration on one side and lower concentration on the other.
endocytosisA process in which a cell takes in large molecules and particulate matter by folding the plasma membrane inward to form vesicles that engulf external material.
exocytosisA process in which internal vesicles fuse with the plasma membrane to release large molecules and other materials from the cell.
metabolic energyEnergy derived from cellular metabolism, typically in the form of ATP, used to power cellular processes.
passive transportThe net movement of molecules from regions of high concentration to regions of low concentration without the direct input of metabolic energy.
plasma membraneThe selectively permeable membrane that surrounds the cell, composed of phospholipids, proteins, and other molecules that regulate what enters and exits the cell.
selective permeabilityThe property of a membrane that allows certain substances to pass through while restricting the passage of others.
soluteA substance dissolved in a solvent to form a solution; the component present in smaller amount in a solution.
vesicleSmall membrane-bound sacs that transport and store materials within or between cells.
water balanceThe regulation of water movement into and out of cells to maintain proper cellular function and organism homeostasis.

2.6 Membrane Transport

TermDefinition
aquaporinsChannel proteins that facilitate the rapid transport of water molecules across cell membranes.
channel proteinMembrane proteins that form pores or channels allowing specific ions or molecules to pass through the plasma membrane.
charged ionAtoms or molecules that have gained or lost electrons and carry an electrical charge, such as sodium (Na⁺) and potassium (K⁺).
concentration gradientA difference in the concentration of a substance across a membrane, with higher concentration on one side and lower concentration on the other.
facilitated diffusionThe passive transport of substances across a membrane through protein channels or carriers, requiring no energy input but moving down the concentration gradient.
membrane polarizationThe development of an electrical charge difference across a membrane caused by the movement of ions.
plasma membraneThe selectively permeable membrane that surrounds the cell, composed of phospholipids, proteins, and other molecules that regulate what enters and exits the cell.
polar moleculeMolecules with uneven distribution of electrical charge that generally cannot cross the hydrophobic membrane interior without assistance.
transport proteinEmbedded membrane proteins that facilitate the movement of hydrophilic substances across the membrane.

2.7 Facilitated Diffusion

TermDefinition
central vacuoleA large organelle in plant cells that stores water and solutes, playing a role in maintaining turgor pressure and osmoregulation.
concentration gradientA difference in the concentration of a substance across a membrane, with higher concentration on one side and lower concentration on the other.
contractile vacuoleAn organelle in protists that collects and expels excess water to maintain osmotic balance.
homeostasisThe maintenance of stable internal environmental conditions in an organism despite external and internal changes.
hypertonicA solution with a higher solute concentration relative to another solution, causing water to move out of the cell.
hypotonicA solution with a lower solute concentration relative to another solution, causing water to move into the cell.
isotonicA solution with the same solute concentration as another solution, resulting in no net movement of water across the membrane.
osmolarityThe concentration of solutes in a solution, which determines the direction of water movement across membranes.
osmoregulationThe process by which organisms maintain water balance and control their internal solute composition and water potential.
osmoregulatory mechanismPhysiological processes that organisms use to maintain water balance and regulate internal solute composition.
osmosisThe movement of water across a semipermeable membrane from regions of high water potential to regions of low water potential.
pressure potentialThe component of water potential representing the physical pressure exerted on water in a cell, often due to cell wall rigidity.
solute concentrationThe amount of dissolved solutes per unit volume of solution, which affects water movement across membranes.
solute potentialThe component of water potential that represents the effect of dissolved solutes in lowering the potential energy of water.
water balanceThe regulation of water movement into and out of cells to maintain proper cellular function and organism homeostasis.
water potentialThe potential energy of water in a system, determined by pressure potential and solute potential, that drives water movement.

2.8 Tonicity and Osmoregulation

TermDefinition
active transportThe movement of ions and molecules across a membrane against their concentration gradient, requiring metabolic energy from ATP.
ATPaseAn enzyme that catalyzes the breakdown of ATP to release energy for active transport and other cellular processes.
electrochemical gradientThe combined effect of the concentration gradient and electrical potential difference across a membrane that influences ion movement.
membrane potentialThe electrical potential difference across a cell membrane, maintained by the Na⁺/K⁺ pump and other ion pumps.
membrane proteinProteins embedded in or attached to the cell membrane that facilitate the transport of molecules and ions across the membrane.
Na⁺/K⁺ pumpAn active transport protein that uses ATP to move sodium ions out of the cell and potassium ions into the cell, maintaining the membrane potential.

2.9 Mechanisms of Transport

TermDefinition
compartmentalizationThe division of the eukaryotic cell into distinct membrane-bound regions that separate different metabolic processes and enzymatic reactions.
enzymatic reactionChemical reactions catalyzed by enzymes that occur within specific cellular compartments to facilitate metabolic processes.
eukaryotic cellCells that contain a membrane-bound nucleus and internal membrane-bound organelles, found in animals, plants, fungi, and protists.
internal membraneMembranes within eukaryotic cells that divide the cell into compartments with specialized functions.
intracellular metabolic processChemical reactions and pathways that occur within the cell to build up or break down molecules for energy and biosynthesis.
membrane-bound organelleSpecialized structures within eukaryotic cells enclosed by a membrane that perform specific cellular functions.
membrane-bound structureOrganelles and compartments in eukaryotic cells that are enclosed by a lipid bilayer membrane, separating their contents from the cytoplasm.
organelleMembrane-bound or non-membrane-bound structures within eukaryotic cells that perform specific cellular functions.
surface areaThe total area of a membrane available for chemical reactions and cellular processes to occur.

🔋Unit 3 – Cellular Energetics

3.1 Enzyme Structure

TermDefinition
activation energyThe minimum energy required for a chemical reaction to proceed; enzymes lower this energy barrier to facilitate reactions.
active siteThe specific region on an enzyme where the substrate binds and the chemical reaction is catalyzed.
biological catalystsSubstances that speed up biological reactions without being consumed in the process; enzymes are the primary biological catalysts in cells.
enzymeProteins that act as biological catalysts to speed up chemical reactions in cells by lowering activation energy.
enzyme-substrate complexThe temporary complex formed when a substrate binds to the active site of an enzyme during a catalyzed reaction.
substrateThe molecule or substance upon which an enzyme acts during a chemical reaction.

3.2 Enzyme Catalysis

TermDefinition
active siteThe specific region on an enzyme where the substrate binds and the chemical reaction is catalyzed.
allosteric siteA binding site on an enzyme other than the active site, where regulatory molecules can bind to affect enzyme activity.
cellular environmentThe internal conditions of a cell, including temperature, pH, and concentrations of molecules, that affect enzyme function.
chemical environmentThe composition of substances surrounding an enzyme that can affect its structure and function.
collision frequencyThe rate at which enzyme and substrate molecules encounter each other in solution, affecting the rate of enzymatic reaction.
competitive inhibitorA molecule that binds reversibly to the active site of an enzyme, competing with substrate for binding and reducing enzyme activity.
denaturationThe disruption of a protein's three-dimensional structure, causing loss of its biological function.
enzymatic reaction rateThe speed at which an enzyme catalyzes the conversion of substrate to product.
enzymeProteins that act as biological catalysts to speed up chemical reactions in cells by lowering activation energy.
enzyme activityThe rate at which an enzyme catalyzes a biochemical reaction under specific cellular conditions.
enzyme efficiencyThe rate at which an enzyme catalyzes a reaction under given conditions.
enzyme functionThe ability of an enzyme to catalyze specific biochemical reactions efficiently.
hydrogen bondWeak attractive forces between a hydrogen atom bonded to an electronegative atom and another electronegative atom, occurring between or within biological molecules.
noncompetitive inhibitorA molecule that binds to an allosteric site on an enzyme, changing the enzyme's shape and reducing its activity without competing with substrate.
optimal pHThe pH at which an enzyme exhibits maximum catalytic activity and efficiency.
optimal temperatureThe temperature at which an enzyme exhibits maximum catalytic activity and efficiency.
productThe molecule produced as a result of an enzymatic reaction.
product concentrationThe relative amount of product molecules present in a solution, which can affect the efficiency of an enzymatic reaction.
protein structureThe three-dimensional arrangement of amino acids in a protein, which determines its properties and function.
reversible denaturationThe process by which a denatured enzyme can regain its original structure and catalytic activity when environmental conditions are restored.
substrateThe molecule or substance upon which an enzyme acts during a chemical reaction.
substrate concentrationThe relative amount of substrate molecules available for an enzyme to catalyze, which affects the rate of enzymatic reaction.
temperatureAn environmental factor that affects the kinetic energy and collision frequency of molecules, influencing enzyme activity.

3.3 Environmental Impacts on Enzyme Function

TermDefinition
cellular processesBiochemical reactions and activities that occur within cells to maintain life and carry out functions.
common ancestryThe concept that all organisms share a common evolutionary origin and are related through descent from earlier ancestral species.
conserved processBiological processes that are maintained relatively unchanged across different organisms and evolutionary time, indicating shared ancestry.
core metabolic pathwaysEssential biochemical sequences that are conserved across different organisms and domains of life, such as glycolysis and oxidative phosphorylation.
coupled reactionsCellular processes where energy-releasing reactions are linked to energy-requiring reactions to transfer energy efficiently.
domainThe three major categories of life (Archaea, Bacteria, and Eukarya) that represent the highest taxonomic rank in biological classification.
energyThe capacity to do work or cause change in living systems; required by all organisms to maintain order and power cellular processes.
energy transferThe movement of energy from one form or location to another through sequential reactions in metabolic pathways.
first law of thermodynamicsThe principle that energy cannot be created or destroyed, only transformed from one form to another.
glycolysisA biochemical pathway in the cytosol that breaks down glucose and releases energy to form ATP, NADH, and pyruvate.
living systemsOrganized biological entities that require energy input to maintain their structure and functions.
metabolic pathwayA series of sequential chemical reactions in cells where the product of one reaction serves as the reactant for the next reaction.
orderThe organized, structured state of a living system that requires continuous energy input to maintain.
oxidative phosphorylationThe synthesis of ATP coupled to electron transport in the electron transport chain during aerobic cellular respiration.
second law of thermodynamicsThe principle that in any energy transformation, some energy is lost as heat and disorder (entropy) in the universe increases.

3.4 Cellular Energy

TermDefinition
adenosine triphosphateThe primary energy currency of cells that powers cellular functions.
ADPAdenosine diphosphate; a molecule that is phosphorylated to form ATP during oxidative phosphorylation.
ATP synthaseA membrane-bound enzyme that uses the proton gradient to drive the synthesis of ATP from ADP and inorganic phosphate.
Calvin cycleThe light-independent reactions of photosynthesis that use ATP and NADPH to produce carbohydrates from carbon dioxide in the stroma.
carbohydratesBiological molecules composed of carbon, hydrogen, and oxygen that serve as a primary source of energy and structural support in living organisms.
carbon fixationThe process in the Calvin cycle that incorporates carbon dioxide into organic molecules.
chemiosmosisThe process by which the flow of protons across a membrane through ATP synthase drives ATP synthesis.
chlorophyllA pigment in chloroplasts that absorbs light energy and transfers electrons to higher energy levels in photosystems.
chloroplastAn organelle in plant cells where photosynthesis occurs, containing thylakoids and stroma.
cyanobacteriaProkaryotic photosynthetic organisms responsible for producing an oxygenated atmosphere through photosynthesis.
electrochemical gradientThe combined effect of the concentration gradient and electrical potential difference across a membrane that influences ion movement.
electron transportA series of protein complexes in thylakoid membranes that transfer electrons and help generate ATP and NADPH during the light reactions.
electron transport chainA series of protein complexes in membranes that transfer electrons and establish an electrochemical gradient to generate ATP during photosynthesis and cellular respiration.
granaStacks of thylakoid membranes organized within the chloroplast where light reactions of photosynthesis occur.
inorganic phosphateA free phosphate group (Pi) that is added to ADP to form ATP during ATP synthesis.
light reactionsThe light-dependent stage of photosynthesis that occurs in the thylakoid membrane and produces ATP and NADPH.
NADP⁺An electron carrier molecule that accepts electrons during photosynthesis and is reduced to NADPH to carry energy for the Calvin cycle.
NADPHThe reduced form of NADP⁺ that carries electrons and energy from the light reactions to power the Calvin cycle.
oxidation/reduction reactionsChemical reactions in which electrons are transferred between molecules, occurring in the electron transport chain during photosynthesis.
photophosphorylationThe synthesis of ATP from ADP and inorganic phosphate using energy from the proton gradient established during the light reactions of photosynthesis.
photosynthesisThe series of reactions that use carbon dioxide, water, and light energy to produce carbohydrates and oxygen, allowing organisms to capture and store energy from the sun.
photosystemOrganized complexes of chlorophyll pigments and proteins in thylakoid membranes that capture light energy during the light reactions.
photosystem IA light-harvesting complex embedded in the thylakoid membrane that uses light energy to boost electrons to a higher energy level and reduce NADP⁺ to NADPH.
photosystem IIA light-harvesting complex embedded in the thylakoid membrane that uses light energy to boost electrons and splits water to replace lost electrons.
prokaryotic photosynthesisPhotosynthetic processes in prokaryotic organisms, particularly cyanobacteria, that were the evolutionary foundation for eukaryotic photosynthesis.
proton gradientA difference in proton concentration across a membrane, with higher concentration on one side than the other.
stromaThe fluid-filled space inside the chloroplast where the Calvin cycle occurs.
thylakoidMembrane structures within the chloroplast that contain chlorophyll pigments and electron transport proteins, where light reactions occur.
thylakoid membraneThe membrane system within chloroplasts where light-dependent reactions of photosynthesis occur, containing photosystems and electron transport chains.
water splittingThe photolysis of water molecules during photosystem II that releases electrons, protons, and oxygen.

3.5 Photosynthesis

TermDefinition
adenosine triphosphateThe primary energy currency of cells that powers cellular functions.
ADPAdenosine diphosphate; a molecule that is phosphorylated to form ATP during oxidative phosphorylation.
aerobic cellular respirationThe metabolic pathway that uses oxygen as the terminal electron acceptor to generate ATP from biological macromolecules.
ATP synthaseA membrane-bound enzyme that uses the proton gradient to drive the synthesis of ATP from ADP and inorganic phosphate.
biological macromoleculesLarge organic molecules such as carbohydrates, lipids, and proteins that store chemical energy used in cellular respiration.
carbon dioxideA gas released during the Krebs cycle as organic molecules are oxidized.
cellular respirationThe metabolic process by which cells break down biological macromolecules to release energy and synthesize ATP.
chemiosmosisThe process by which the flow of protons across a membrane through ATP synthase drives ATP synthesis.
decouplingThe separation of oxidative phosphorylation from electron transport, resulting in heat generation instead of ATP synthesis.
electrochemical gradientThe combined effect of the concentration gradient and electrical potential difference across a membrane that influences ion movement.
electron acceptorA molecule that receives electrons during a redox reaction; oxygen is the terminal electron acceptor in aerobic respiration.
electron transport chainA series of protein complexes in membranes that transfer electrons and establish an electrochemical gradient to generate ATP during photosynthesis and cellular respiration.
endothermic organismsOrganisms that generate and regulate their own body heat through metabolic processes.
enzyme-catalyzed reactionsChemical reactions in cells that are accelerated by enzymes, which act as biological catalysts.
eukaryotesOrganisms whose cells contain a membrane-bound nucleus and other membrane-bound organelles.
FADA coenzyme that accepts electrons during the Krebs cycle, forming FADH₂.
FADH₂Flavin adenine dinucleotide (reduced form); an electron carrier that delivers electrons to the electron transport chain.
fermentationAn anaerobic metabolic process that regenerates ATP and NAD+ without using the electron transport chain or oxygen.
glucoseA six-carbon sugar whose energy is released through cellular respiration to power cellular functions.
glycolysisA biochemical pathway in the cytosol that breaks down glucose and releases energy to form ATP, NADH, and pyruvate.
heatThermal energy generated when oxidative phosphorylation is uncoupled from electron transport in cellular respiration.
inner mitochondrial membraneThe innermost membrane of the mitochondrion that contains the electron transport chain and is the site of ATP synthesis.
inorganic phosphateA free phosphate group (Pi) that is added to ADP to form ATP during ATP synthesis.
intermembrane spaceThe region between the inner and outer mitochondrial membranes where protons accumulate during the electron transport chain.
Krebs cycleA biochemical cycle in the mitochondrial matrix that oxidizes pyruvate, releases CO₂, generates ATP, and transfers electrons via NAD⁺ and FAD.
lactic acidAn organic molecule produced during fermentation in the absence of oxygen.
mitochondriaMembrane-bound organelles in eukaryotic cells that are the primary site of aerobic cellular respiration and ATP synthesis.
mitochondrial matrixThe innermost compartment of the mitochondrion where the Krebs cycle occurs.
mitochondrionAn organelle where pyruvate is oxidized and ATP is generated through the Krebs cycle and electron transport chain.
NAD⁺A coenzyme that accepts electrons during glycolysis and the Krebs cycle, forming NADH.
NADHNicotinamide adenine dinucleotide (reduced form); an electron carrier that delivers electrons to the electron transport chain.
oxidationThe process of losing electrons, which occurs when pyruvate and other molecules are broken down in the Krebs cycle.
oxidation-reduction reactionsChemical reactions involving the transfer of electrons between molecules, where one molecule is oxidized and another is reduced.
oxidative phosphorylationThe synthesis of ATP coupled to electron transport in the electron transport chain during aerobic cellular respiration.
oxygenAn element that is a prevalent component of biological molecules and is found in carbohydrates, lipids, proteins, and nucleic acids.
plasma membraneThe selectively permeable membrane that surrounds the cell, composed of phospholipids, proteins, and other molecules that regulate what enters and exits the cell.
prokaryotesSingle-celled organisms without a membrane-bound nucleus, such as bacteria and archaea.
proton gradientA difference in proton concentration across a membrane, with higher concentration on one side than the other.
pyruvateA three-carbon molecule produced from glycolysis that is transported to the mitochondrion for further oxidation.

🦠Unit 4 – Cell Communication and Cell Cycle

4.1 Cell Communication

TermDefinition
antigen-presenting cellsImmune cells that display antigens on their surface to communicate with and activate other immune cells like helper T-cells.
cell communicationThe process by which cells transmit information to and receive information from other cells to coordinate activities and responses.
cell-to-cell contactDirect physical interaction between cells that allows them to communicate and influence each other's behavior.
chemical signalingA form of cell communication that occurs when cells release chemical signals that travel through the environment to affect distant cells.
direct contactA form of cell communication that occurs when cells physically touch one another to exchange signals or information.
estrogenA steroid hormone that travels long distances through the bloodstream to regulate female sexual characteristics and reproductive function.
helper T-cellsImmune cells that communicate with antigen-presenting cells and coordinate immune responses by signaling other immune cells.
human growth hormoneA hormone secreted by the pituitary gland that travels long distances to promote growth and metabolism in target tissues.
insulinA hormone that helps regulate blood sugar levels as part of negative feedback mechanisms.
killer T-cellsImmune cells that interact with other cells through direct contact to identify and destroy infected or abnormal cells.
local regulatorsSignaling molecules that target cells in the vicinity of the signal-emitting cell, enabling short-distance cell communication.
morphogensSignaling molecules that diffuse through embryonic tissues and establish concentration gradients to direct cell differentiation and development.
neurotransmittersChemical messengers released by neurons that transmit signals across synapses to target cells over short distances.
quorum sensingA form of bacterial communication in which microbes regulate gene expression and behavior in response to population density through chemical messengers.
testosteroneA steroid hormone that travels long distances through the bloodstream to regulate male sexual characteristics and reproductive function.
thyroid hormonesHormones produced by the thyroid gland that travel long distances to regulate metabolism and growth in target cells.

4.2 Introduction to Signal Transduction

TermDefinition
cellular responseThe change in cell behavior or function that results from signal transduction, such as gene expression or cell division.
cyclic AMPA second messenger molecule (cAMP) that relays and amplifies intracellular signals.
G protein-coupled receptorA type of receptor protein in eukaryotes that uses G proteins to relay signals inside the cell.
hormoneA signaling molecule that travels through the bloodstream to reach distant target cells.
intracellular domainThe portion of a receptor protein located inside the cell that changes shape upon ligand binding to initiate signal transduction.
ligandA chemical messenger that binds to a receptor protein to initiate a signal transduction pathway.
ligand-binding domainThe region of a receptor protein that recognizes and binds to a specific chemical messenger.
ligand-gated channelAn ion channel that opens or closes in response to ligand binding.
phosphorylationThe addition of a phosphate group to a protein, a key protein modification in signal transduction pathways.
phosphorylation cascadeA series of sequential phosphorylation events where one phosphorylated protein activates the next, amplifying a cellular signal.
protein modificationA chemical change made to a protein that alters its structure or function during signal transduction.
receptor proteinA protein that binds to signaling molecules and initiates a signal transduction pathway by undergoing a conformational change.
second messengerA small molecule, such as cAMP, that relays and amplifies signals from a receptor inside the cell.
signal amplificationThe process by which a signaling cascade increases the strength or magnitude of an incoming signal.
signal receptionThe initial step in signal transduction where a cell receives a signal, typically through a receptor protein.
signal transduction pathwayA series of molecular events that transmits a signal from outside a cell to inside, resulting in a cellular response.
signaling cascadeA series of molecular interactions that relay and amplify signals from a receptor to produce a cellular response.

4.3 Signal Transduction

TermDefinition
cell functionThe specific activities and processes that a cell performs to maintain life and respond to its environment.
cellular responseThe change in cell behavior or function that results from signal transduction, such as gene expression or cell division.
chemical messengersSignaling molecules used by cells to communicate with other cells and coordinate cellular responses.
cytokinesSignaling molecules that regulate gene expression to allow for cell replication and division.
downstream componentsThe proteins and molecules in a signal transduction pathway that are activated or inhibited after the initial signal is received by a receptor.
epinephrineA hormone and neurotransmitter that triggers cellular responses including the breakdown of glycogen for energy mobilization.
ethyleneA plant hormone whose levels regulate the production of enzymes involved in fruit ripening.
gene expressionThe process by which information from a gene is used to synthesize functional gene products, typically proteins, which can be influenced by environmental conditions.
glycogen breakdownThe metabolic process of breaking down glycogen into glucose in response to cellular signals such as epinephrine.
HOX genesGenes that regulate the development of animal body plans by controlling the identity and positioning of body segments during embryonic development.
mutationAn alteration in a DNA sequence that can cause changes in the type or amount of protein produced and the resulting phenotype.
phenotypeThe observable physical and biochemical characteristics of an organism, determined by both genetic and environmental factors.
pheromonesChemical signals released by organisms that trigger specific behavioral or developmental responses in other organisms of the same species.
programmed cell deathProgrammed cell death, a controlled process in which a cell actively participates in its own destruction.
quorum sensingA form of bacterial communication in which microbes regulate gene expression and behavior in response to population density through chemical messengers.
receptor proteinA protein that binds to signaling molecules and initiates a signal transduction pathway by undergoing a conformational change.
signal transduction pathwayA series of molecular events that transmits a signal from outside a cell to inside, resulting in a cellular response.
signaling moleculeA chemical substance that carries a signal from one cell to another, initiating a cellular response through a signal transduction pathway.

4.4 Changes in Signal Transduction Pathways

TermDefinition
feedback mechanismsBiological processes that organisms use to maintain their internal environments in response to changes.
glucagonA hormone that helps regulate blood sugar levels as part of negative feedback mechanisms.
homeostasisThe maintenance of stable internal environmental conditions in an organism despite external and internal changes.
insulinA hormone that helps regulate blood sugar levels as part of negative feedback mechanisms.
negative feedbackA feedback mechanism that reduces the initial stimulus to maintain homeostasis by returning a system back to its target set point.
positive feedbackA feedback mechanism that amplifies responses and moves a variable further away from its initial set point, intensifying the stimulus to produce system change.
set pointThe target physiological condition that an organism's feedback mechanisms work to maintain or return to.

4.5 Homeostasis & Feedback Loops

TermDefinition
anaphaseThe stage of mitosis in which paired sister chromatids separate and spindle fibers pull them toward opposite poles of the cell.
asexual reproductionReproduction that produces offspring genetically identical to the parent without the fusion of gametes.
cell cycleA highly regulated series of events that controls the growth and reproduction of eukaryotic cells.
cell plateThe structure that forms during cytokinesis in plant cells to divide the cytoplasm and create a new cell wall.
centromereThe region of a chromosome where sister chromatids are joined and where kinetochores attach.
centrosomesCellular structures that serve as the main microtubule-organizing centers and move to opposite poles of the cell during mitosis.
chromatinThe form in which DNA exists during interphase, consisting of DNA and associated proteins.
chromosomesStructures in eukaryotic cells composed of DNA and proteins that carry genetic information and are transmitted to daughter cells during mitosis.
cleavage furrowThe indentation that forms during cytokinesis in animal cells to divide the cytoplasm.
cytokinesisThe division of the cytoplasm that occurs after mitosis, resulting in the physical separation of a parent cell into two daughter cells.
daughter cellsThe two genetically identical cells produced as a result of mitosis.
eukaryotic cellCells that contain a membrane-bound nucleus and internal membrane-bound organelles, found in animals, plants, fungi, and protists.
G0 phaseA stage in which a cell no longer divides but can reenter the cell cycle in response to appropriate cues.
G1 phaseThe first phase of interphase in which the cell is metabolically active and duplicates organelles and cytosolic components.
G2 phaseThe second phase of interphase in which protein synthesis occurs, ATP is produced in large quantities, and centrosomes replicate.
genomeThe complete set of genetic material (DNA) in a cell.
interphaseThe phase of the cell cycle between successive mitotic divisions during which the cell grows and replicates its DNA.
metaphaseThe stage of mitosis in which spindle fibers align chromosomes along the equator (metaphase plate) of the cell.
mitosisA process of cell division in eukaryotes that produces two genetically identical daughter cells, each with a complete copy of the parent cell's genome.
mitotic spindleA structure composed of spindle fibers that forms during mitosis and is responsible for separating and moving chromosomes to opposite poles of the cell.
nuclear envelopeA membrane-bound component of the endomembrane system that surrounds the nucleus.
prophaseThe first stage of mitosis in which sister chromatids condense, the mitotic spindle begins to form, and centrosomes move to opposite poles of the cell.
S phaseThe synthesis phase of interphase in which DNA replicates to form two sister chromatids connected at a centromere.
sister chromatidsTwo identical copies of a chromosome joined at the centromere, formed after DNA replication.
spindle fibersProtein structures that extend from centrosomes and attach to chromosomes to move them during mitosis.
telophaseThe final stage of mitosis in which the mitotic spindle breaks down, a new nuclear envelope develops around each set of chromosomes, and the cytoplasm begins to divide.
tissue repairThe process by which mitosis generates new cells to replace damaged or worn-out cells in an organism.

4.6 Cell Cycle

TermDefinition
cancerA disease resulting from uncontrolled cell division due to disruptions in cell cycle regulation, allowing cells to divide abnormally and form tumors.
cell cycleA highly regulated series of events that controls the growth and reproduction of eukaryotic cells.
cell cycle disruptionsAbnormal interruptions or malfunctions in the regulated progression of cell division stages, which can lead to cellular dysfunction or disease.
checkpointsInternal control points in the cell cycle that regulate progression and ensure cells meet specific conditions before advancing to the next phase.
cyclin-dependent kinasesEnzymes that are activated by cyclins and phosphorylate target proteins to regulate progression through the cell cycle.
cyclinsRegulatory proteins that fluctuate in concentration during the cell cycle and control the timing of cell cycle events.
internal controlsRegulatory mechanisms within a cell that monitor conditions and control cell cycle progression.
programmed cell deathProgrammed cell death, a controlled process in which a cell actively participates in its own destruction.

👪Unit 5 – Heredity

5.1 Meiosis

TermDefinition
cell plateThe structure that forms during cytokinesis in plant cells to divide the cytoplasm and create a new cell wall.
centromereThe region of a chromosome where sister chromatids are joined and where kinetochores attach.
centrosomesCellular structures that serve as the main microtubule-organizing centers and move to opposite poles of the cell during mitosis.
chiasmataPoints where homologous chromosomes physically connect and exchange genetic material during meiosis.
chromosomesStructures in eukaryotic cells composed of DNA and proteins that carry genetic information and are transmitted to daughter cells during mitosis.
cleavage furrowThe indentation that forms during cytokinesis in animal cells to divide the cytoplasm.
cytokinesisThe division of the cytoplasm that occurs after mitosis, resulting in the physical separation of a parent cell into two daughter cells.
daughter cellsThe two genetically identical cells produced as a result of mitosis.
diploidA cell or organism containing two complete sets of chromosomes, typically represented as 2n.
gameteA haploid reproductive cell (sperm or egg) produced by meiosis that fuses with another gamete during fertilization.
genetic contentThe total amount and composition of DNA and genes present in a cell.
haploidA cell or organism containing a single set of chromosomes, typically represented as n.
homologous chromosomesPairs of chromosomes, one inherited from each parent, that have the same genes at corresponding locations.
kinetochoreA protein structure at the centromere where microtubules of the meiotic spindle attach to pull chromatids apart.
meiosisA process of cell division in diploid organisms that produces haploid gamete cells, reducing chromosome number by half for sexual reproduction.
meiotic spindleThe structure of microtubules that forms during meiosis to separate chromosomes toward opposite poles of the cell.
metaphase plateThe equatorial region of the cell where chromosomes align during metaphase of meiosis.
microtubuleProtein filaments that make up the meiotic spindle and pull chromosomes toward opposite poles of the cell.
mitosisA process of cell division in eukaryotes that produces two genetically identical daughter cells, each with a complete copy of the parent cell's genome.
nuclear envelopeA membrane-bound component of the endomembrane system that surrounds the nucleus.
sister chromatidsTwo identical copies of a chromosome joined at the centromere, formed after DNA replication.
spindle apparatusA structure composed of microtubules that forms during cell division and is responsible for moving and separating chromosomes.
synapsisThe pairing and alignment of homologous chromosomes during Prophase I of meiosis.

5.2 Meiosis and Genetic Diversity

TermDefinition
crossing overThe exchange of genetic material between non-sister chromatids of homologous chromosomes during prophase I of meiosis.
fertilizationThe fusion of two gametes to form a diploid zygote, combining genetic material from both parents.
gameteA haploid reproductive cell (sperm or egg) produced by meiosis that fuses with another gamete during fertilization.
genetic diversityThe variety of different alleles and genes present within a population or species.
haploidA cell or organism containing a single set of chromosomes, typically represented as n.
homologous chromosomesPairs of chromosomes, one inherited from each parent, that have the same genes at corresponding locations.
maternal chromosomesChromosomes inherited from the mother.
meiosisA process of cell division in diploid organisms that produces haploid gamete cells, reducing chromosome number by half for sexual reproduction.
meiosis IThe first division of meiosis in which homologous chromosomes separate, reducing the chromosome number from diploid to haploid.
meiosis IIThe second division of meiosis in which sister chromatids separate, similar to mitosis.
non-sister chromatidsChromatids from different homologous chromosomes that can exchange genetic material during crossing over.
nondisjunctionThe failure of chromosomes to separate properly during mitosis or meiosis, resulting in changes in chromosome number.
paternal chromosomesChromosomes inherited from the father.
prophase IThe first stage of meiosis I in which homologous chromosomes pair up and crossing over occurs.
random assortmentThe random distribution of homologous chromosome pairs to daughter cells during meiosis I, contributing to genetic variation.
recombinationThe process by which genetic material is exchanged between homologous chromosomes, creating new combinations of alleles.
sexual reproductionReproduction involving the fusion of gametes from two parents, producing genetically diverse offspring.
sister chromatidsTwo identical copies of a chromosome joined at the centromere, formed after DNA replication.

5.3 Mendelian Genetics

TermDefinition
alleleDifferent versions of a gene that can exist at the same location on a chromosome.
autosomal inheritanceInheritance of traits controlled by genes located on autosomes (non-sex chromosomes).
dihybrid crossA cross between two organisms that differ in two traits controlled by two different genes.
diploidA cell or organism containing two complete sets of chromosomes, typically represented as 2n.
dominant alleleAn allele that is expressed in the phenotype when present in either homozygous or heterozygous condition.
genetic variationDifferences in DNA sequences and alleles that exist within a population.
genetically linkedGenes located close together on the same chromosome that tend to be inherited together.
genotypeThe genetic makeup of an organism; the specific alleles present for each gene.
haploid gametesSex cells (sperm or egg) that contain half the chromosome number of the parent organism.
heterozygousHaving two different alleles for a particular gene.
homozygousHaving two identical alleles for a particular gene.
Mendel's law of independent assortmentThe principle that alleles of different genes assort independently during gamete formation when genes are on different chromosomes.
Mendel's laws of segregationThe principle that allele pairs separate during gamete formation, with each gamete receiving one allele for each gene.
monohybrid crossA cross between two organisms that differ in a single trait controlled by one gene.
pedigreeA diagram showing the inheritance of a trait through multiple generations of a family.
phenotypeThe observable physical and biochemical characteristics of an organism, determined by both genetic and environmental factors.
Punnett squareA diagram used to predict the genotypes and phenotypes of offspring from a cross between two parents.
recessive alleleAn allele that is expressed in the phenotype only when present in homozygous condition.
sex-linked inheritanceInheritance of traits controlled by genes located on sex chromosomes.
test crossA cross between an organism expressing a dominant phenotype and a homozygous recessive organism to determine the genotype.
zygoteA fertilized egg cell formed from the fusion of two gametes.

5.4 Non-Mendelian Genetics

TermDefinition
chloroplast DNAGenetic material located in chloroplasts that can be inherited independently of nuclear DNA, typically through the maternal lineage in plants.
codominanceA pattern of inheritance in which both alleles are fully expressed in the heterozygote, resulting in a phenotype different from either homozygote.
deviations from Mendel's modelPatterns of inheritance that do not follow the predicted ratios and rules established by Mendel's laws of inheritance.
genetic mappingThe process of determining the relative positions and distances of genes on a chromosome based on recombination frequencies.
genetically linkedGenes located close together on the same chromosome that tend to be inherited together.
incomplete dominanceA pattern of inheritance in which neither allele is completely dominant, resulting in a blended phenotype in the heterozygote that is intermediate between the two homozygous phenotypes.
map distanceThe relative distance between two genes on a chromosome, measured in map units and calculated based on the frequency of recombination between them.
maternal inheritanceA pattern of inheritance in which traits are transmitted only or primarily through the female parent, typically due to organellar DNA in the egg or ovule.
mitochondrial DNAGenetic material located in mitochondria that can be inherited independently of nuclear DNA, typically through the maternal lineage.
non-nuclear inheritanceInheritance of traits determined by genes located in organelles such as mitochondria and chloroplasts rather than in the nucleus.
phenotypic ratiosThe proportions of different observable traits in offspring, compared to predicted ratios based on genetic crosses.
pleiotropyA phenomenon in which a single gene influences the expression of multiple, seemingly unrelated traits.
sex-linked traitsTraits determined by genes located on sex chromosomes (X or Y), which show inheritance patterns different from autosomal traits.

5.5 Environmental Effects on Phenotype

TermDefinition
environmental conditionsExternal factors such as temperature, light, pH, and other physical or chemical factors that influence gene expression and phenotype development.
gene expressionThe process by which information from a gene is used to synthesize functional gene products, typically proteins, which can be influenced by environmental conditions.
genotypeThe genetic makeup of an organism; the specific alleles present for each gene.
phenotypeThe observable physical and biochemical characteristics of an organism, determined by both genetic and environmental factors.
phenotypic plasticityThe ability of a single genotype to produce different phenotypes in response to different environmental conditions.

👻Unit 6 – Gene Expression and Regulation

6.1 DNA and RNA Structure

TermDefinition
adenineA purine nitrogenous base found in both DNA and RNA that pairs with thymine in DNA or uracil in RNA.
base pairingThe specific pairing of nitrogenous bases between DNA strands (A-T and C-G) or in RNA (A-U).
circular chromosomesRing-shaped DNA structures typically found in prokaryotic organisms that contain genetic information.
cytosineA pyrimidine nitrogenous base found in both DNA and RNA that pairs with guanine.
DNA moleculesDeoxyribonucleic acid molecules that store genetic information in living organisms.
eukaryotesOrganisms whose cells contain a membrane-bound nucleus and other membrane-bound organelles.
guanineA purine nitrogenous base found in both DNA and RNA that pairs with cytosine.
hereditary informationGenetic material passed from parent organisms to offspring that determines inherited traits.
hereditary materialGenetic material that is passed from parent organisms to offspring and carries the instructions for life.
histonesProteins around which DNA wraps to condense and organize chromosomes in eukaryotic cells.
linear chromosomesChromosomes with defined endpoints found in eukaryotic cell nuclei, as opposed to the circular chromosomes found in prokaryotes.
nucleic acidMacromolecules composed of nucleotides containing carbon, hydrogen, oxygen, nitrogen, and phosphorus that store and transmit genetic information.
nucleotideThe monomer unit of nucleic acids, consisting of a five-carbon sugar, a phosphate group, and a nitrogenous base.
plasmidsSmall, circular, extra-chromosomal DNA molecules found in prokaryotes and eukaryotes that carry genetic information.
prokaryotesSingle-celled organisms without a membrane-bound nucleus, such as bacteria and archaea.
purinesNitrogenous bases with a double ring structure; includes adenine and guanine.
pyrimidinesNitrogenous bases with a single ring structure; includes cytosine, thymine, and uracil.
RNA moleculesRibonucleic acid molecules that can store and transmit genetic information in some organisms.
thymineA pyrimidine nitrogenous base found in DNA that pairs with adenine.
uracilA pyrimidine nitrogenous base found in RNA that pairs with adenine.

6.2 Replication

TermDefinition
5' to 3' directionThe direction in which DNA is synthesized, from the 5' carbon of one sugar to the 3' carbon of the next sugar in the phosphate backbone.
complementary DNAA newly synthesized strand of DNA that is formed based on the base-pairing rules with the template strand.
DNA polymeraseAn enzyme that synthesizes new DNA strands by adding nucleotides in the 5' to 3' direction.
DNA replicationThe process by which DNA makes an exact copy of itself, which can be subject to errors that cause mutations.
genetic informationThe hereditary instructions encoded in DNA that direct the synthesis of proteins and determine organism traits.
helicaseAn enzyme that unwinds the double helix structure of DNA by breaking hydrogen bonds between base pairs during replication.
lagging strandThe strand of DNA synthesized discontinuously in short fragments (Okazaki fragments) in the 5' to 3' direction during replication.
leading strandThe strand of DNA synthesized continuously in the 5' to 3' direction during replication.
ligaseAn enzyme that joins DNA fragments together by forming phosphodiester bonds between adjacent nucleotides on the lagging strand.
replication forkThe Y-shaped structure formed during DNA replication where the double helix unwinds and new strands are synthesized.
RNA primerA short RNA sequence synthesized by primase that provides the 3'-OH group required for DNA polymerase to begin DNA synthesis.
semiconservative replicationA mechanism of DNA replication in which each new DNA molecule consists of one original strand and one newly synthesized complementary strand.
template strandThe original strand of DNA that serves as a pattern for synthesizing a new complementary strand during replication.
topoisomeraseAn enzyme that relieves tension and relaxes supercoiling in DNA ahead of the replication fork.

6.3 Transcription and RNA Processing

TermDefinition
3' to 5' directionThe direction in which RNA polymerase reads the template DNA strand during transcription.
5' to 3' directionThe direction in which DNA is synthesized, from the 5' carbon of one sugar to the 3' carbon of the next sugar in the phosphate backbone.
alternative splicingThe process by which different combinations of exons are joined together during mRNA processing, producing multiple versions of mature mRNA from a single gene.
anticodonA three-base sequence on tRNA that base pairs with a complementary codon on mRNA during translation.
codonA sequence of three nucleotides on mRNA that specifies a particular amino acid or stop signal during translation.
exonA coding segment of a eukaryotic gene that is retained in the mature mRNA molecule after RNA processing.
genetic informationThe hereditary instructions encoded in DNA that direct the synthesis of proteins and determine organism traits.
guanosine triphosphate capA modified guanosine nucleotide structure added to the 5' end of eukaryotic mRNA that aids in ribosomal recognition.
intronA non-coding segment of a eukaryotic gene that is removed from the mRNA transcript during RNA processing.
poly-A tailA string of adenine nucleotides added to the 3' end of eukaryotic mRNA that increases mRNA stability.
primary peptide sequenceThe initial linear arrangement of amino acids in a protein as determined by the mRNA codon sequence during translation.
ribosomeThe cellular structure composed of rRNA and proteins that catalyzes the synthesis of polypeptides during translation.
RNA polymeraseAn enzyme that catalyzes the synthesis of RNA by reading a DNA template strand and linking RNA bases in sequence.
RNA processingA series of enzyme-mediated modifications to eukaryotic mRNA transcripts, including capping, polyadenylation, and splicing.
template strandThe original strand of DNA that serves as a pattern for synthesizing a new complementary strand during replication.
transcriptionThe process by which RNA polymerase synthesizes RNA molecules using a DNA template strand.
transfer RNAAn RNA molecule that binds specific amino acids and uses anticodon sequences to recognize and pair with mRNA codons during translation.
translationThe process by which mRNA is decoded by ribosomes to synthesize a polypeptide chain.

6.4 Translation

TermDefinition
amino acidOrganic molecules that serve as the building blocks of proteins, each composed of a central carbon atom bonded to a hydrogen atom, a carboxyl group, an amine group, and a variable R group.
codonA sequence of three nucleotides on mRNA that specifies a particular amino acid or stop signal during translation.
elongationThe stage of translation in which amino acids are sequentially added to the growing polypeptide chain.
eukaryoticReferring to organisms that have a membrane-bound nucleus and organelles, such as animals, plants, and fungi.
genetic codeThe set of rules by which nucleotide sequences in mRNA are translated into amino acid sequences in proteins.
genotypeThe genetic makeup of an organism; the specific alleles present for each gene.
initiationThe first stage of translation in which the ribosome assembles on the mRNA at the start codon.
messenger RNAThe RNA molecule that carries genetic information from DNA and serves as the template for protein synthesis.
phenotypeThe observable physical and biochemical characteristics of an organism, determined by both genetic and environmental factors.
polypeptideA chain of amino acids linked together by peptide bonds.
prokaryoticReferring to organisms that lack a membrane-bound nucleus and organelles, such as bacteria.
proteinMacromolecules composed of amino acids linked together, containing carbon, hydrogen, oxygen, nitrogen, and often sulfur, that perform diverse functions in cells.
retrovirusA virus that uses reverse transcriptase to convert its RNA genome into DNA for integration into the host genome.
reverse transcriptaseAn enzyme that synthesizes DNA from an RNA template, used by retroviruses to convert their RNA genome to DNA.
ribosomal RNAThe RNA component of the ribosome that catalyzes peptide bond formation.
ribosomeThe cellular structure composed of rRNA and proteins that catalyzes the synthesis of polypeptides during translation.
rough endoplasmic reticulumEndoplasmic reticulum with attached ribosomes on its cytoplasmic surface; site of synthesis for proteins destined for secretion or membrane insertion.
start codonThe codon AUG where translation begins, coding for the amino acid methionine.
stop codonA codon that signals the termination of translation and the release of the completed polypeptide chain.
terminationThe final stage of translation in which the ribosome releases the completed polypeptide chain.
transcriptionThe process by which RNA polymerase synthesizes RNA molecules using a DNA template strand.
transfer RNAAn RNA molecule that binds specific amino acids and uses anticodon sequences to recognize and pair with mRNA codons during translation.
translationThe process by which mRNA is decoded by ribosomes to synthesize a polypeptide chain.

6.5 Regulation of Gene Expression

TermDefinition
cell differentiationThe process by which cells become specialized through the selective expression of genes for tissue-specific proteins.
constitutively expressedGenes that are continuously transcribed and translated at relatively constant levels.
coordinately regulatedThe simultaneous regulation of multiple genes as a group, often in response to the same signal or regulatory mechanism.
epigenetic changesReversible modifications of DNA or histone proteins that affect gene expression without changing the DNA sequence.
gene productsThe proteins or RNA molecules produced by the expression of genes that determine cellular function and organism phenotype.
inducibleGenes that are expressed only in response to specific environmental signals or regulatory molecules.
inducible systemA gene regulation system in prokaryotes where genes are turned on in response to the presence of a substrate or signal molecule.
operonsIn prokaryotes, a cluster of genes under the control of a single regulatory sequence that are transcribed together as one unit.
phenotypeThe observable physical and biochemical characteristics of an organism, determined by both genetic and environmental factors.
regulatory proteinsProteins that bind to regulatory sequences to control whether genes are transcribed.
regulatory sequencesStretches of DNA that interact with regulatory proteins to control the transcription of genes.
repressible systemA gene regulation system in prokaryotes where genes are turned off in response to the presence of a substrate or signal molecule.
tissue-specific proteinsProteins whose expression is limited to particular cell types or tissues, contributing to cell differentiation.
transcriptionThe process by which RNA polymerase synthesizes RNA molecules using a DNA template strand.
transcription factorsProteins that bind to specific DNA sequences (promoters or enhancers) to regulate the initiation of transcription and control gene expression.

6.6 Gene Expression and Cell Specialization

TermDefinition
differential gene expressionThe selective expression of different genes in different cells or at different times, resulting in variation in which proteins are produced.
enhancerA DNA sequence that can be located upstream or downstream of a gene and where transcription factors bind to increase the rate of transcription.
gene expressionThe process by which information from a gene is used to synthesize functional gene products, typically proteins, which can be influenced by environmental conditions.
gene regulationThe mechanisms that control when and how often a gene is expressed, determining the amount of gene product produced.
negative regulatory moleculesMolecules that inhibit gene expression by binding to DNA and blocking transcription.
phenotypeThe observable physical and biochemical characteristics of an organism, determined by both genetic and environmental factors.
phenotypic differencesObservable variations in the physical or biochemical characteristics of cells or organisms resulting from differences in gene expression and protein production.
promoterA DNA sequence located upstream of a gene where RNA polymerase and transcription factors bind to initiate transcription.
RNA polymeraseAn enzyme that catalyzes the synthesis of RNA by reading a DNA template strand and linking RNA bases in sequence.
small RNA moleculesShort RNA sequences, such as microRNAs, that regulate gene expression by controlling mRNA translation or degradation.
transcriptionThe process by which RNA polymerase synthesizes RNA molecules using a DNA template strand.
transcription factorsProteins that bind to specific DNA sequences (promoters or enhancers) to regulate the initiation of transcription and control gene expression.
transcription start siteThe location on DNA where RNA polymerase begins synthesizing RNA, relative to which promoter and enhancer sequences are positioned.

6.7 Mutations

TermDefinition
aneuploidyAn abnormal number of chromosomes resulting from nondisjunction, often causing new phenotypes.
beneficial mutationA mutation that has a positive effect on the organism's phenotype or survival.
chromosome structureThe physical organization of chromosomes, including the arrangement and integrity of genetic material; alterations can lead to genetic disorders.
conjugationA process of horizontal gene transfer in prokaryotes involving direct cell-to-cell transfer of DNA.
cystic fibrosisA genetic disorder caused by mutations in the CFTR gene that disrupt ion transport in cells.
detrimental mutationA mutation that has a negative effect on the organism's phenotype or survival.
DNA repair mechanismsCellular processes that identify and correct errors in DNA to maintain genetic integrity.
DNA replicationThe process by which DNA makes an exact copy of itself, which can be subject to errors that cause mutations.
DNA sequencesThe specific order of nucleotide bases (A, T, G, C) in a DNA molecule that encodes genetic information.
frameshift mutationA type of mutation in which one or more nucleotides are inserted or deleted, causing the reading frame of the genetic code to shift.
genetic variationDifferences in DNA sequences and alleles that exist within a population.
genotypeThe genetic makeup of an organism; the specific alleles present for each gene.
meiosisA process of cell division in diploid organisms that produces haploid gamete cells, reducing chromosome number by half for sexual reproduction.
mitosisA process of cell division in eukaryotes that produces two genetically identical daughter cells, each with a complete copy of the parent cell's genome.
mutationAn alteration in a DNA sequence that can cause changes in the type or amount of protein produced and the resulting phenotype.
mutationsRandom changes in DNA sequences that create new genetic variations in populations.
natural selectionA major mechanism of evolution in which individuals with more favorable phenotypes are more likely to survive and reproduce, passing advantageous traits to subsequent generations.
neutral mutationA mutation that has no effect on the organism's phenotype or protein function.
nondisjunctionThe failure of chromosomes to separate properly during mitosis or meiosis, resulting in changes in chromosome number.
nonsense mutationA type of point mutation that results in a premature stop codon, terminating protein synthesis early.
phenotypeThe observable physical and biochemical characteristics of an organism, determined by both genetic and environmental factors.
point mutationA type of mutation in which one nucleotide is substituted for a different nucleotide in the DNA sequence.
prokaryotesSingle-celled organisms without a membrane-bound nucleus, such as bacteria and archaea.
reading frameThe grouping of nucleotides into consecutive triplets (codons) that are read during translation to produce a protein.
recombinationThe process by which genetic material is exchanged between homologous chromosomes, creating new combinations of alleles.
reproductive processesBiological mechanisms that generate genetic variation and are conserved across different organisms.
sickle cell anemiaA genetic disorder caused by mutations in hemoglobin genes that result in abnormal red blood cell shape and reduced oxygen transport.
silent mutationA type of mutation in which a change in the nucleotide sequence has no effect on the amino acid sequence or protein produced.
transductionA process of horizontal gene transfer in prokaryotes where viruses transfer genetic information from one cell to another.
transformationA process of horizontal gene transfer in prokaryotes where cells take up DNA from their environment.
transpositionThe movement of DNA segments (transposons) within or between DNA molecules, creating genetic variation.
triploidyA condition in which an organism has three complete sets of chromosomes instead of the normal two.
variationDifferences in traits among individuals within a population due to genetic and environmental factors.

6.8 Biotechnology

TermDefinition
bacterial transformationThe process of introducing foreign DNA into bacterial cells, allowing them to take up and express new genetic material.
DNA denaturationThe process of separating double-stranded DNA into single strands, typically by heating.
DNA fingerprintA unique pattern of DNA sequences from an individual that allows for comparison and identification of DNA samples.
DNA sequencingTechnology that determines the precise order of nucleotides in a DNA molecule.
gel electrophoresisA laboratory process that separates DNA fragments based on their size and electrical charge by moving them through a gel matrix.
gene cloningThe process of creating identical copies of a specific DNA fragment for propagation and study.
genetic engineering techniquesMethods used to analyze, manipulate, or alter DNA and RNA in organisms.
polymerase chain reactionA technique that amplifies specific DNA fragments through repeated cycles of denaturing, primer annealing, and DNA extension.
primer annealingThe binding of short DNA sequences (primers) to complementary regions on a template DNA strand during PCR.
transgenic animalsAnimals that have been genetically modified to contain foreign DNA from another organism.

🦍Unit 7 – Natural Selection

7.1 Introduction to Natural Selection

TermDefinition
abiotic environmentThe non-living physical and chemical components of an ecosystem, such as temperature, light, and water.
biotic environmentThe living components of an ecosystem, including organisms and their interactions.
competition for limited resourcesThe struggle among organisms for access to finite environmental resources, which results in differential survival and reproduction.
differential survivalThe unequal survival rates of individuals in a population based on differences in their traits or phenotypes.
evolutionThe process of change in living organisms over time, involving genetic modifications and adaptation to environments.
evolutionary fitnessThe measure of an organism's reproductive success, determined by how many viable offspring it produces.
favorable phenotypeA set of observable traits that increases an organism's likelihood of survival and reproduction in its environment.
genetic variationDifferences in DNA sequences and alleles that exist within a population.
natural selectionA major mechanism of evolution in which individuals with more favorable phenotypes are more likely to survive and reproduce, passing advantageous traits to subsequent generations.
offspringThe individual organisms produced by reproduction from parent organisms.
phenotypeThe observable physical and biochemical characteristics of an organism, determined by both genetic and environmental factors.
populationA group of organisms of the same species living in the same geographic area.
reproductive successAn organism's ability to produce viable offspring that survive and reproduce.
traitsSpecific characteristics or features of an organism that can be inherited and passed to offspring.

7.10 Speciation

TermDefinition
adaptive radiationThe rapid evolution and diversification of a single ancestral species into multiple species that occupy different habitats or ecological niches.
allopatric speciationSpeciation that occurs in populations that are geographically isolated from one another.
biological species conceptA definition of species based on the ability of organisms to interbreed and produce viable, fertile offspring.
convergent evolutionEvolution in which different populations or species develop similar phenotypic adaptations in response to similar selective pressures.
divergent evolutionEvolution in which populations or species become increasingly different from each other, often due to adaptation to different habitats.
fertileCapable of producing offspring; able to reproduce.
gene flowThe transfer of alleles into or out of a population as a result of migration.
geographic isolationThe physical separation of populations by geographic barriers that prevents gene flow between them.
gradualismA pattern of evolution in which evolutionary change occurs slowly and continuously over hundreds of thousands or millions of years.
interbreedingThe process of mating and reproduction between members of different populations or groups.
phenotypic diversificationAn increase in the variety of observable physical traits within or among populations.
post-zygotic mechanismsReproductive barriers that reduce the viability or fertility of hybrid offspring after zygote formation.
pre-zygotic mechanismsReproductive barriers that prevent fertilization from occurring by preventing gamete fusion before zygote formation.
punctuated equilibriumA pattern of evolution in which rapid evolutionary change occurs after long periods of stasis, or little change.
reproductive isolationThe inability of different populations or species to interbreed and produce viable, fertile offspring.
reproductively isolatedA condition in which two populations are unable to interbreed and exchange genetic information, preventing gene flow between them.
selective pressureEnvironmental factors that influence which traits are advantageous for survival and reproduction in a population.
speciationThe evolutionary process by which new species arise from existing species through reproductive isolation and genetic divergence.
stasisA period of little or no evolutionary change in a population or species.
sympatric speciationSpeciation that occurs within populations that share the same geographic area or have geographic overlap.
viableCapable of living, developing, or functioning successfully.

7.11 Extinction

TermDefinition
adaptive allelesAlleles that increase an organism's fitness and ability to survive and reproduce in a particular environment.
alleleDifferent versions of a gene that can exist at the same location on a chromosome.
deleterious allelesAlleles that decrease an organism's fitness and ability to survive and reproduce in a particular environment.
environmental pressureExternal environmental conditions or stressors that affect the survival and reproduction of organisms in a population.
extinctionThe permanent disappearance of a species from Earth, occurring when all individuals of that species die.
genetic diversityThe variety of different alleles and genes present within a population or species.
population dynamicsChanges in population size and structure over time, influenced by interactions with other populations and environmental factors.
resilienceThe ability of an ecosystem to withstand and recover from environmental changes or disturbances.
selective pressureEnvironmental factors that influence which traits are advantageous for survival and reproduction in a population.

7.12 Variations in Population

TermDefinition
base-pairingThe complementary bonding between nitrogenous bases in nucleic acids that enables accurate replication and information transfer.
fossil evidencePhysical remains or traces of ancient organisms preserved in rock that provide direct evidence of past life on Earth.
genetic continuityThe unbroken transmission of genetic information from one generation to the next through accurate replication of genetic material.
genetic materialMolecules that store and transmit hereditary information in living organisms.
geological evidencePhysical and chemical evidence from Earth's rocks, minerals, and geological structures that provides information about Earth's history and the conditions of early life.
RNA replicationThe process by which RNA molecules make copies of themselves through base-pairing interactions.
RNA world hypothesisA scientific model proposing that RNA served as the earliest genetic material and catalyst in primitive life forms before the evolution of DNA and proteins.
scientific evidenceData and observations from empirical research that support or refute scientific claims, including evidence for evolution.

7.2 Natural Selection

TermDefinition
fitnessAn organism's ability to survive and reproduce successfully, passing its genes to the next generation.
moleculesChemical compounds made up of atoms that perform specific functions within cells.
natural selectionA major mechanism of evolution in which individuals with more favorable phenotypes are more likely to survive and reproduce, passing advantageous traits to subsequent generations.
phenotypic variationDifferences in observable characteristics or traits among individuals in a population.
populationA group of organisms of the same species living in the same geographic area.
selective pressureEnvironmental factors that influence which traits are advantageous for survival and reproduction in a population.
variationDifferences in traits among individuals within a population due to genetic and environmental factors.

7.3 Artificial Selection

TermDefinition
artificial selectionThe process by which humans deliberately choose organisms with specific traits to breed together, thereby changing the frequency of traits in a population over time.
diversityThe variety of different traits, alleles, and genetic variation present within a population.
variationDifferences in traits among individuals within a population due to genetic and environmental factors.

7.4 Population Genetics

TermDefinition
allele frequenciesThe proportion or percentage of a specific allele in a population's gene pool.
bottleneck effectA type of genetic drift that occurs when a population is drastically reduced in size, causing random changes in allele frequencies.
evolutionThe process of change in living organisms over time, involving genetic modifications and adaptation to environments.
founder effectA type of genetic drift that occurs when a small group of individuals establishes a new population, resulting in allele frequencies that differ from the original population.
gene flowThe transfer of alleles into or out of a population as a result of migration.
genetic driftRandom changes in allele frequencies in a population due to nonselective processes, particularly in small populations.
genetic makeupThe complete set of alleles and genes present in a population that determine the heritable traits of its members.
genetic variationDifferences in DNA sequences and alleles that exist within a population.
migrationThe movement of individuals (and their alleles) into or out of a population; must be absent for Hardy-Weinberg Equilibrium.
mutationAn alteration in a DNA sequence that can cause changes in the type or amount of protein produced and the resulting phenotype.
mutationsRandom changes in DNA sequences that create new genetic variations in populations.
random occurrencesUnpredictable events that affect allele frequencies in populations independent of natural selection.
random processesUnpredictable events that cause changes in allele frequencies in populations, independent of natural selection.

7.5 Hardy-Weinberg Equilibrium

TermDefinition
allele frequenciesThe proportion or percentage of a specific allele in a population's gene pool.
genotype frequenciesThe proportion or percentage of each genotype combination in a population.
Hardy-Weinberg EquilibriumA model describing a non-evolving population where allele and genotype frequencies remain constant across generations.
large population sizeA condition for Hardy-Weinberg Equilibrium where a population is large enough to prevent random changes in allele frequencies due to chance events.
migrationThe movement of individuals (and their alleles) into or out of a population; must be absent for Hardy-Weinberg Equilibrium.
mutationsRandom changes in DNA sequences that create new genetic variations in populations.
natural selectionA major mechanism of evolution in which individuals with more favorable phenotypes are more likely to survive and reproduce, passing advantageous traits to subsequent generations.
non-evolving populationA population in which allele frequencies do not change over time because evolutionary forces are absent.
null hypothesisA baseline model used for comparison; in this context, Hardy-Weinberg Equilibrium serves as a reference point to detect when populations are evolving.
random matingA condition where individuals in a population mate without preference for specific genotypes; required for Hardy-Weinberg Equilibrium.

7.6 Evidence of Evolution

TermDefinition
biochemical dataInformation about molecular and chemical composition of organisms, such as DNA and proteins, that provides evidence for evolution.
carbon-14 datingA radiometric dating method that measures the decay of the carbon-14 isotope to determine the age of fossils.
common ancestryThe concept that all organisms share a common evolutionary origin and are related through descent from earlier ancestral species.
DNA nucleotide sequencesThe specific order of nucleotides in DNA that can be compared between organisms to determine evolutionary relationships.
evolutionThe process of change in living organisms over time, involving genetic modifications and adaptation to environments.
extant organismsLiving organisms that exist in the present day.
extinct organismsOrganisms that no longer exist and are known only through fossil records.
fossilPreserved remains or traces of organisms from past geological time periods.
geographical dataInformation about the distribution and location of organisms across different regions that provides evidence for evolution.
geological dataInformation about rock layers and Earth's history used to date fossils and understand evolutionary timescales.
isotope decayThe process by which unstable isotopes break down over time at a predictable rate, used to determine the age of rocks and fossils.
mathematical dataQuantitative analysis and statistical information used to model and support evolutionary patterns and relationships.
molecular evidenceData from DNA nucleotide sequences and protein amino acid sequences that demonstrates evolutionary relationships between organisms.
morphological homologiesStructural similarities in different organisms that indicate common ancestry and evolutionary relationships.
morphological traitsPhysical characteristics or structures of organisms used to determine evolutionary relationships.
physical dataObservable structural and anatomical information about organisms that provides evidence for evolution.
protein amino acid sequencesThe specific order of amino acids in proteins that can be compared between organisms to provide evidence for evolution.
scientific evidenceData and observations from empirical research that support or refute scientific claims, including evidence for evolution.
vestigial structuresReduced or non-functional body parts that are remnants from ancestral organisms and provide evidence of common ancestry.

7.7 Common Ancestry

TermDefinition
common ancestryThe concept that all organisms share a common evolutionary origin and are related through descent from earlier ancestral species.
eukaryotesOrganisms whose cells contain a membrane-bound nucleus and other membrane-bound organelles.
functional evidenceObservable processes and biochemical functions of cells and organisms that indicate evolutionary relationships and common ancestry.
intronA non-coding segment of a eukaryotic gene that is removed from the mRNA transcript during RNA processing.
linear chromosomesChromosomes with defined endpoints found in eukaryotic cell nuclei, as opposed to the circular chromosomes found in prokaryotes.
membrane-bound organelleSpecialized structures within eukaryotic cells enclosed by a membrane that perform specific cellular functions.
structural evidencePhysical characteristics of cells and organisms that indicate evolutionary relationships and common ancestry.

7.8 Continuing Evolution

TermDefinition
antibiotic resistanceThe ability of bacteria and other microorganisms to survive and reproduce in the presence of antibiotics that would normally kill them.
chemotherapy drug resistanceThe ability of cancer cells to survive and proliferate despite exposure to chemotherapy drugs.
emergent diseasesInfectious diseases that have recently appeared in a population or are rapidly increasing in incidence or geographic range.
evolutionThe process of change in living organisms over time, involving genetic modifications and adaptation to environments.
fossil recordThe preserved remains and traces of organisms from past geological periods that document changes in life forms over time.
genomic changesAlterations in the DNA sequence of an organism's genome that accumulate over time.
herbicide resistanceThe ability of plants to survive and grow in the presence of herbicides designed to kill them.
pathogensOrganisms or agents, such as bacteria, viruses, or parasites, that cause disease in host organisms.
pesticide resistanceThe ability of organisms, particularly insects and plants, to survive exposure to pesticides that would normally be lethal.

7.9 Phylogeny

TermDefinition
cladogramA branching diagram that shows hypothetical evolutionary relationships among lineages without indicating time scale or the amount of evolutionary change between groups.
DNA sequence similaritiesResemblances in the order of nucleotides in DNA between different organisms, used to infer evolutionary relationships.
evolutionary relationshipA connection between organisms based on their shared ancestry and descent from a common ancestor.
molecular clockA method that uses the rate of molecular change (mutations) to estimate the time since organisms diverged from a common ancestor.
molecular evidenceData from DNA nucleotide sequences and protein amino acid sequences that demonstrates evolutionary relationships between organisms.
morphological similaritiesStructural and physical resemblances between organisms based on body form and anatomy.
morphological traitsPhysical characteristics or structures of organisms used to determine evolutionary relationships.
most recent common ancestorThe most immediate ancestral species or population from which two or more groups diverged during evolution.
nodesPoints on a phylogenetic tree or cladogram that represent the most recent common ancestor of two or more groups or lineages.
out-groupThe lineage in a phylogenetic tree or cladogram that is least closely related to the remainder of the organisms being compared.
phylogenetic treeA diagram that shows hypothetical evolutionary relationships among lineages, including time scale and the amount of evolutionary change over time.
protein sequence similaritiesResemblances in the order of amino acids in proteins between different organisms, used to infer evolutionary relationships.
shared derived charactersTraits that are present in multiple lineages and were inherited from a common ancestor, indicating common ancestry and used to construct phylogenetic trees and cladograms.
speciationThe evolutionary process by which new species arise from existing species through reproductive isolation and genetic divergence.

🌲Unit 8 – Ecology

8.1 Responses to the Environment

TermDefinition
audible signalsCommunication through sound that can be perceived by hearing.
behavioral responseA change in an organism's actions or conduct in reaction to changes in its internal or external environment.
bird songsVocalizations produced by birds used for communication, territorial defense, and mate attraction.
chemical signalsCommunication through chemical substances that can be perceived by smell or taste.
colony behaviorCoordinated behavior of insects living together in organized groups with specialized roles.
cooperative behaviorBehavior in which organisms work together in ways that benefit the group and may increase individual fitness.
differential reproductive successVariation in the number of offspring produced by different individuals, leading to differences in genetic contribution to future generations.
diurnal activityBehavioral pattern in which an organism is active primarily during daytime hours.
dominanceA behavioral or social status indicating an organism's rank or authority within a group.
electrical signalsCommunication through electrical impulses that can be perceived by specialized receptors.
fight-or-flight responseA physiological response that prepares an organism to either confront or escape from a perceived threat.
fitnessAn organism's ability to survive and reproduce successfully, passing its genes to the next generation.
flock behaviorCoordinated movement and action of a group of birds flying together.
herd behaviorCoordinated movement and action of a group of animals of the same species.
innate behaviorsBehaviors that are genetically determined and performed without prior learning or experience.
kin selectionThe process by which organisms increase their fitness by helping relatives survive and reproduce, even at a cost to themselves.
kinesisA non-directional movement response of an organism that changes in rate based on stimulus intensity.
learned behaviorsBehaviors that are acquired through experience, observation, or training rather than being genetically determined.
natural selectionA major mechanism of evolution in which individuals with more favorable phenotypes are more likely to survive and reproduce, passing advantageous traits to subsequent generations.
nocturnal activityBehavioral pattern in which an organism is active primarily during nighttime hours.
pack behaviorCoordinated behavior of animals living and hunting together as a group.
parent and offspring interactionsBehaviors and communication between parents and their young that affect survival and development.
photoperiodismA physiological response in plants to changes in the length of day and night, affecting processes like flowering and dormancy.
phototropismA directional growth response in plants toward or away from a light source.
physiological responseA change in an organism's internal body functions or processes in reaction to changes in its internal or external environment.
plant responses to herbivoryBehavioral or physiological mechanisms by which plants respond to damage or feeding by herbivorous organisms.
populationA group of organisms of the same species living in the same geographic area.
predator warningA behavioral or physiological response in which an organism communicates the presence of danger to other organisms.
predatory warningsSignals or behaviors used by organisms to alert others to the presence of a predator.
reproductive successAn organism's ability to produce viable offspring that survive and reproduce.
schooling behaviorCoordinated movement and action of a group of fish swimming together.
signaling behaviorsBehaviors that organisms use to communicate information to other organisms through various mechanisms.
swarming behaviorCoordinated movement of a large group of insects or animals moving together.
tactile signalsCommunication through touch that can be perceived by physical contact.
taxisA directed movement response of an organism toward or away from a stimulus.
territorial markingBehavior in which organisms use signals or physical marks to indicate and defend their territory.
territoryAn area defended by an organism or group of organisms against others of the same or different species.
visual signalsCommunication through light, color, or movement that can be perceived by sight.

8.2 Energy Flow Through Ecosystems

TermDefinition
abiotic reservoirsNon-living components of ecosystems that store matter, such as atmosphere, soil, and water.
ammonificationThe process by which decomposers break down organic nitrogen compounds into ammonia.
asexual reproductionReproduction that produces offspring genetically identical to the parent without the fusion of gametes.
assimilationThe process by which organisms take up and incorporate nutrients into their biological molecules.
autotrophsOrganisms that capture energy from physical or chemical sources in the environment and convert it into organic compounds to fuel their own growth and metabolism.
biogeochemical cyclesCycles that move matter and nutrients between biotic and abiotic reservoirs in ecosystems.
biomassThe total mass of living organisms in a population or trophic level.
biomesLarge geographic areas with similar climate, vegetation, and animal life.
biotic reservoirsLiving organisms and organic matter that store matter within ecosystems.
carbon cycleThe cycle involving the movement of carbon atoms through the biosphere, atmosphere, and organisms.
carnivoresHeterotrophs that obtain energy by consuming other animals.
cellular respirationThe metabolic process by which cells break down biological macromolecules to release energy and synthesize ATP.
chemosynthetic organismsAutotrophs that capture energy from inorganic chemical compounds in their environment, independent of sunlight.
combustionThe burning of organic matter or fossil fuels, which releases carbon dioxide into the atmosphere.
communityA group of interacting populations of different species that live in the same area and change over time based on interactions between those populations.
condensationThe process by which water vapor cools and changes into liquid form in the atmosphere.
conservation of matterThe principle that matter is neither created nor destroyed but is recycled through biogeochemical cycles.
decomposerOrganisms, such as bacteria and fungi, that break down dead organic matter and return nutrients to the ecosystem.
decompositionThe process by which decomposers break down dead organic matter, releasing carbon dioxide and nutrients.
denitrificationThe process by which soil microorganisms convert nitrate back into nitrogen gas, returning it to the atmosphere.
ecosystemA community of living organisms interacting with each other and their physical environment.
ecosystem disruptionA disturbance to the normal functioning and balance of an ecosystem caused by changes in environmental factors.
ectothermsOrganisms that lack efficient internal mechanisms for regulating body temperature and rely on behavioral or environmental factors to regulate their temperature.
endothermsOrganisms that use thermal energy generated by their own metabolism to maintain a relatively constant body temperature.
energy availabilityThe amount of energy accessible to organisms in an ecosystem, which can change based on factors like sunlight or food resources.
energy flowThe movement of energy through an ecosystem from the sun through producers and consumers to decomposers.
energy storageThe accumulation of energy in an organism, resulting from a net gain of energy that can be used for growth and reproduction.
evaporationThe process by which water changes from liquid to gas and enters the atmosphere.
food chainA linear sequence showing the transfer of energy from one organism to the next through feeding relationships.
food webA network of interconnected food chains showing multiple feeding relationships in an ecosystem.
herbivoresHeterotrophs that obtain energy by consuming plants and other autotrophs.
heterotrophsOrganisms that obtain energy by consuming organic matter derived from autotrophs or other organisms.
homeostasisThe maintenance of stable internal environmental conditions in an organism despite external and internal changes.
hydrologic cycleThe cycle involving water movement and storage through evaporation, condensation, precipitation, and transpiration.
matter cyclesThe movement and recycling of chemical elements and compounds between organisms and the physical environment.
metabolismThe sum of all chemical reactions in an organism that produce energy and build or break down molecules.
nitrificationThe process by which soil microorganisms convert ammonia into nitrite and nitrate.
nitrogen cycleThe cycle involving the movement of nitrogen between the atmosphere, soil, and organisms through various microbial processes.
nitrogen fixationThe process by which nitrogen gas from the atmosphere is converted into ammonia by microorganisms.
omnivoresHeterotrophs that obtain energy by consuming both plants and animals.
phosphorus cycleThe cycle involving the movement of phosphorus through soil, organisms, and water in ecosystems.
photosynthesisThe series of reactions that use carbon dioxide, water, and light energy to produce carbohydrates and oxygen, allowing organisms to capture and store energy from the sun.
photosynthetic organismsAutotrophs that capture energy from sunlight and convert it into chemical energy stored in organic compounds.
populationA group of organisms of the same species living in the same geographic area.
population sizeThe total number of individual organisms of the same species in a population at a given time.
precipitationWater falling from clouds to Earth's surface as rain, snow, sleet, or hail.
primary consumerAn organism that feeds directly on producers; a herbivore.
primary productivityThe rate at which photosynthetic organisms capture solar energy and convert it into organic matter in an ecosystem.
producerOrganisms, primarily plants and photosynthetic organisms, that convert light energy into chemical energy through photosynthesis.
quaternary consumerAn organism that feeds on tertiary consumers; a carnivore at the fourth trophic level.
reproductive diapauseA period of suspended or delayed reproduction in response to unfavorable environmental conditions or limited energy availability.
reproductive strategiesDifferent approaches organisms use to reproduce in response to environmental conditions and energy availability.
scavengersHeterotrophs that obtain energy by consuming dead organisms or organic waste.
secondary consumerAn organism that feeds on primary consumers; a carnivore or omnivore at the second trophic level.
sexual reproductionReproduction involving the fusion of gametes from two parents, producing genetically diverse offspring.
tertiary consumerAn organism that feeds on secondary consumers; a carnivore at the third trophic level.
transpirationThe process by which water is released from plants into the atmosphere.
trophic levelA position in a food chain or food web occupied by organisms that obtain energy in the same way, including producers, consumers, and decomposers.
trophic pyramidA diagram representing the relative amounts of energy or biomass at each trophic level in an ecosystem.
weatheringThe process by which rocks break down, releasing minerals such as phosphate into soil and water.

8.3 Population Ecology

TermDefinition
adaptationA genetic variation that is favored by natural selection and manifests as a trait providing an advantage to an organism in a particular environment.
birth rateThe number of new individuals produced per unit time in a population.
death rateThe number of individuals that die per unit time in a population.
exponential growthPopulation growth that occurs without limiting constraints, resulting in a population that increases at an accelerating rate over time.
per capita growth rateThe rate at which a population grows per individual organism in the population.
population growth dynamicsThe changes in population size over time, determined by the rates at which individuals are born and die.
population sizeThe total number of individual organisms of the same species in a population at a given time.

8.4 Effect of Density of Populations

TermDefinition
carrying capacityThe maximum population size of a species that an ecosystem can sustain indefinitely based on available resources.
density-dependent factorsLimiting factors whose effects on population growth increase as population density increases, such as disease, competition, and predation.
density-independent factorsLimiting factors that affect population growth regardless of population density, such as weather, natural disasters, and seasonal changes.
logistic growth modelA model of population growth that accounts for limited resources, showing how population growth slows as it approaches carrying capacity.
resource availabilityThe quantity and accessibility of resources in an environment that support population growth and survival.

8.5 Community Ecology

TermDefinition
commensalismA symbiotic relationship where one organism benefits while the other organism is neither helped nor harmed.
communityA group of interacting populations of different species that live in the same area and change over time based on interactions between those populations.
community structureThe composition and organization of a community, determined by the types and relative abundances of populations and their interactions.
competitionAn interaction between populations where organisms compete for the same limited resources, negatively affecting both populations.
mutualismA symbiotic relationship where both organisms benefit from the interaction.
niche partitioningThe division of resources among species that allows multiple populations to coexist by utilizing different aspects of their environment.
parasitismA symbiotic relationship where one organism (parasite) benefits while the other organism (host) is harmed.
populationA group of organisms of the same species living in the same geographic area.
population dynamicsChanges in population size and structure over time, influenced by interactions with other populations and environmental factors.
predationAn interaction where one organism (predator) hunts and consumes another organism (prey).
predator/prey interactionsRelationships between populations where one organism (predator) hunts and consumes another (prey), influencing population dynamics and energy flow.
Simpson's Diversity IndexA quantitative measure of species diversity that accounts for both the number of species and the evenness of their abundance in a community.
species compositionThe identity and relative abundance of different species present in a community.
species diversityA measure of the variety of species in a community, accounting for both the number of species and their relative abundance.
symbiosisA close, long-term relationship between two different species living together.
trophic cascadesEcological changes triggered by the addition or removal of top predators, affecting multiple levels of the food chain.

8.6 Biodiversity

TermDefinition
abiotic factorsNon-living physical and chemical components of an ecosystem, such as temperature, light, water, and soil.
biotic factorsLiving organisms and biological components of an ecosystem, including animals, plants, fungi, and microorganisms.
ecosystemA community of living organisms interacting with each other and their physical environment.
ecosystem collapseThe sudden loss of ecosystem structure and function, often resulting from the removal of a keystone species.
ecosystem diversityThe variety of different ecosystems and the range of species and ecological processes within them.
keystone speciesA species whose presence or absence has a disproportionate effect on the structure and function of an ecosystem relative to its abundance.
producerOrganisms, primarily plants and photosynthetic organisms, that convert light energy into chemical energy through photosynthesis.
resilienceThe ability of an ecosystem to withstand and recover from environmental changes or disturbances.

8.7 Disruptions to Ecosystems

TermDefinition
adaptationA genetic variation that is favored by natural selection and manifests as a trait providing an advantage to an organism in a particular environment.
biogeographical studiesScientific research that examines the distribution of organisms and ecosystems across different geographic regions and how they change over time.
biomagnificationThe process by which the concentration of a substance, such as a toxin or pollutant, increases in organisms at higher trophic levels in a food chain.
competitorsOrganisms that vie for the same resources, such as food, water, or space.
continental driftThe movement of Earth's continents over geological time, which alters the distribution of habitats and ecosystems.
ecosystem distributionThe geographic locations and patterns where different ecosystems are found across the biosphere.
ecosystem dynamicsThe interactions and changes that occur within an ecosystem, including relationships between species and how populations respond to environmental changes.
ecosystem structureThe physical organization and composition of an ecosystem, including the arrangement of organisms, habitats, and abiotic factors.
El NiñoA meteorological phenomenon characterized by warming of ocean temperatures in the Pacific, causing significant changes in global weather patterns and ecosystems.
environmental pressureExternal environmental conditions or stressors that affect the survival and reproduction of organisms in a population.
eutrophicationThe process by which excessive nutrients, particularly nitrogen and phosphorus, accumulate in a water body, leading to excessive algal growth and oxygen depletion.
extinctionThe permanent disappearance of a species from Earth, occurring when all individuals of that species die.
genetic variationDifferences in DNA sequences and alleles that exist within a population.
geological activityPhysical processes and events related to Earth's structure and composition, such as volcanic eruptions, earthquakes, and continental drift, that can alter ecosystems.
global climate changeLong-term shifts in Earth's climate patterns and average temperatures that affect ecosystems worldwide.
habitat changeAlterations in the physical and biological conditions of a habitat that affect the organisms living there.
heterozygote advantageA situation where the heterozygous genotype has higher relative fitness than either homozygous genotype.
heterozygous genotypeA genotype with two different alleles for a particular gene.
homozygous dominant genotypeA genotype with two copies of the dominant allele for a particular gene.
homozygous recessive genotypeA genotype with two copies of the recessive allele for a particular gene.
invasive speciesA species that is introduced to a new environment, either intentionally or unintentionally, and can exploit available niches or outcompete native species for resources.
meteorological activityAtmospheric and weather-related phenomena, such as storms, precipitation patterns, and climate events, that influence ecosystem conditions.
mutationsRandom changes in DNA sequences that create new genetic variations in populations.
native speciesSpecies that naturally occur and belong in a particular ecosystem.
nicheThe specific role and position a species has in its environment, including the resources it uses and the conditions it requires to survive.
outcompeteTo surpass other organisms in competition for limited resources, often resulting in reduced survival or reproduction of the competing species.
predatorsOrganisms that hunt and consume other organisms for food.
relative fitnessThe measure of an organism's reproductive success compared to other individuals in the population.
selectionThe process by which certain traits become more or less common in a population based on their effect on survival and reproduction.
traitA characteristic or feature of an organism that is determined by its genes and expressed in its phenotype.

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