Cisternae are flattened, membrane-bound sacs found within the endoplasmic reticulum (ER) and Golgi apparatus, playing a crucial role in the processing and transport of proteins. These structures create a compartmentalized environment that facilitates various biochemical processes, including protein synthesis, modification, and sorting for delivery to their final destinations in the cell. The organization of cisternae allows for the efficient handling of proteins as they move through the endomembrane system.