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Hfr cell

An Hfr cell is a bacterium whose F plasmid has integrated into its chromosome. In Microbiology, it can transfer chromosomal genes to another cell during conjugation.

Last updated July 2026•Fiveable Content Team

What is Hfr cell?

An Hfr cell is a bacterial donor cell with the F factor integrated into its chromosome. Hfr stands for high frequency of recombination, because this setup makes it more likely that recipient cells receive and recombine new bacterial DNA during conjugation.

The big idea is that an Hfr cell starts as an F+ cell, but the F plasmid does not stay separate. Instead, the plasmid DNA inserts into the bacterial chromosome. Once that happens, the cell still behaves like a conjugation donor, but now the DNA transfer can begin in the chromosome region next to the integrated F sequence.

During conjugation, the Hfr cell forms a mating bridge with a recipient cell, often using the F pilus. DNA transfer starts at the origin within the integrated F factor and then continues into adjacent chromosomal genes. This is why Hfr cells can pass along pieces of their chromosome, not just plasmid DNA.

That transfer usually does not finish. The connection between cells is often broken before the whole chromosome, or even the entire F factor, moves across. So the recipient usually stays F- even if it receives some new genes. Those incoming genes can recombine with the recipient chromosome if homologous recombination occurs.

In Microbiology, this matters because Hfr cells are a classic example of horizontal gene transfer. They show how bacteria can gain new traits without reproduction, which is part of why bacterial populations can change so fast. They are also useful in lab genetics, because the order and timing of transferred genes can help map the chromosome.

A common mistake is thinking an Hfr cell is just another name for an F+ cell. The difference is the location of the F factor. In F+ cells, the plasmid is separate and usually transfers as plasmid DNA. In Hfr cells, the F factor is built into the chromosome, so the donor can drag chromosomal genes along with it.

Why Hfr cell matters in MICROBIO

Hfr cells show one of the clearest ways bacteria exchange genetic material without sexual reproduction. That makes them central to understanding genetic diversity in asexual prokaryotes, especially when you are tracing how traits spread through a population.

They also explain why conjugation is not always just plasmid transfer. If you see a question about a donor cell moving chromosomal genes into a recipient, Hfr is usually the setup to think about. The recipient may gain a useful allele, but it usually does not become Hfr itself because the transfer often stops before the full F factor arrives.

This term also comes up in gene mapping. By measuring which genes enter first during interrupted mating, microbiology labs can infer gene order on the bacterial chromosome. That turns Hfr conjugation into a tool, not just a mechanism.

Hfr cells connect directly to antibiotic resistance, virulence, and adaptation because horizontal gene transfer can spread helpful traits quickly across bacterial groups.

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How Hfr cell connects across the course

F+ Cell

An Hfr cell usually starts from an F+ cell, but the F plasmid is no longer separate. That difference changes what gets transferred during conjugation. With an F+ cell, the plasmid can move as a plasmid. With an Hfr cell, the integrated plasmid can pull nearby chromosomal genes into the transfer process.

Conjugation

Hfr cells use conjugation to move DNA from one bacterium to another. The conjugation bridge forms the physical route for transfer, and the process is what makes Hfr useful for gene mapping. If you understand the steps of conjugation, Hfr becomes easier to place in the bigger horizontal gene transfer picture.

Plasmid

The F plasmid is the piece of DNA that defines the Hfr state once it integrates into the chromosome. Because plasmids can move between cells, they are a major source of bacterial genetic change. In Hfr cells, that mobile plasmid DNA behaves differently because it is inserted into the chromosome instead of floating independently.

F pilus

The F pilus helps connect the donor and recipient during conjugation. An Hfr cell can use this structure to begin DNA transfer, but the pilus itself is not the DNA source. It is the attachment and transfer structure that makes gene movement possible.

Is Hfr cell on the MICROBIO exam?

A quiz or lab question may give you a conjugation diagram and ask whether the donor is F+, Hfr, or a regular recipient. Look for the clue that chromosomal genes are being transferred, because that points to an Hfr cell. You may also be asked why the recipient usually stays F- after mating, and the answer is that the full F factor usually is not completely transferred before the bridge breaks.

In a genetics problem, you might trace the order of transferred genes from interrupted mating data. The gene that appears earliest is closest to the origin of transfer, and later genes were farther away on the chromosome. That is how Hfr cells are used to build chromosome maps in microbiology.

Hfr cell vs F+ Cell

These are easy to mix up because both can act as donors in conjugation. The difference is that an F+ cell carries the F plasmid separately, while an Hfr cell has that plasmid integrated into the chromosome. That integration is what lets Hfr cells transfer chromosomal genes at high frequency.

Key things to remember about Hfr cell

  • An Hfr cell is a bacterium whose F plasmid has integrated into its chromosome.

  • Hfr cells transfer chromosomal DNA during conjugation, not just plasmid DNA.

  • The transfer usually stops early, so the recipient often gets only part of the donor genome.

  • Hfr cells are a classic example of horizontal gene transfer in Microbiology.

  • Interrupted mating experiments with Hfr cells can be used to map bacterial genes.

Frequently asked questions about Hfr cell

What is an Hfr cell in Microbiology?

An Hfr cell is a bacterial cell with the F plasmid integrated into its chromosome. During conjugation, it can transfer part of its chromosomal DNA to another bacterium, which may then recombine with the recipient's genome.

How is an Hfr cell different from an F+ cell?

An F+ cell carries the F plasmid separately, while an Hfr cell has that plasmid built into the chromosome. Because of that integration, Hfr cells often transfer chromosomal genes along with F-factor DNA.

Why does an Hfr cell usually not make the recipient Hfr too?

The full F factor is usually the last part to transfer, and the mating bridge often breaks before that happens. So the recipient may get new chromosomal genes, but it often does not receive the complete F sequence needed to become Hfr.

How are Hfr cells used in gene mapping?

Scientists can interrupt conjugation at different times and see which genes moved first. The order and timing of transfer show where genes sit on the bacterial chromosome, which makes Hfr cells useful for mapping.