🦠microbiology review

Antigen-binding cleft

Written by the Fiveable Content Team • Last updated August 2025
Written by the Fiveable Content Team • Last updated August 2025

Definition

The antigen-binding cleft is a groove on the major histocompatibility complex (MHC) molecule where processed antigens are presented to T lymphocytes. It plays a critical role in the immune response by allowing T cells to recognize and respond to pathogens.

5 Must Know Facts For Your Next Test

  1. The antigen-binding cleft is found on both MHC class I and class II molecules.
  2. MHC class I molecules present endogenous antigens, while MHC class II molecules present exogenous antigens.
  3. The binding cleft's structure determines which peptides can be presented to T cells.
  4. T cell receptors (TCRs) specifically interact with the peptide-MHC complex via the antigen-binding cleft.
  5. Mutations or polymorphisms in the MHC genes can affect the binding efficiency and immune recognition.
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