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🦠Microbiology

Key Bacterial Cell Structures

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Why This Matters

Understanding bacterial cell structures isn't just about memorizing parts—it's about recognizing how each component contributes to bacterial survival, pathogenicity, and the mechanisms we exploit for treatment. You're being tested on your ability to connect structure to function, explain how bacteria differ from eukaryotes, and identify which structures make certain bacteria more dangerous or more vulnerable to antibiotics. Concepts like selective permeability, horizontal gene transfer, virulence factors, and environmental resistance all trace back to specific cellular components.

Don't just memorize a list of structures. Know what each structure does, why it matters clinically, and how it compares to similar structures in other organisms. When an exam question asks why Gram-negative bacteria are harder to treat or how bacteria develop antibiotic resistance, you need to connect those answers directly to cell architecture.


Structural Integrity and Protection

These structures form the bacterial cell's physical boundaries, maintaining shape, regulating what enters and exits, and protecting against environmental threats. The interplay between the cell wall and plasma membrane determines how bacteria respond to antibiotics, osmotic stress, and immune attack.

Cell Wall

  • Peptidoglycan composition—this unique polymer is the target of beta-lactam antibiotics like penicillin, making it clinically critical
  • Gram staining distinction reflects wall thickness: Gram-positive bacteria have thick peptidoglycan layers, while Gram-negative have thin layers plus an outer membrane
  • Osmotic protection prevents cell lysis in hypotonic environments, explaining why cell wall-targeting antibiotics cause bacterial death

Plasma Membrane

  • Phospholipid bilayer acts as the selective permeability barrier, controlling nutrient uptake and waste removal
  • Embedded proteins facilitate transport, energy production (electron transport chain location), and cell signaling
  • No sterols in most bacteria (unlike eukaryotes), which explains why antifungals targeting ergosterol don't affect bacteria

Capsule

  • Polysaccharide or protein coating provides an antiphagocytic layer that helps bacteria evade immune cells
  • Virulence factor—encapsulated strains of Streptococcus pneumoniae are far more pathogenic than non-encapsulated strains
  • Biofilm contribution aids surface adherence and protects bacterial communities from antibiotics and desiccation

Compare: Cell wall vs. Capsule—both provide protection, but the cell wall is essential for structural integrity (its loss kills the cell), while the capsule is optional and primarily enhances immune evasion. If an FRQ asks about virulence factors, capsule is your go-to example.


Genetic Information and Expression

These components house, replicate, and express the bacterial genome. Understanding how bacteria store and share genetic information explains antibiotic resistance spread and is foundational for molecular biology techniques.

Nucleoid

  • Non-membrane-bound region contains the single circular chromosome—a key prokaryotic distinction from eukaryotes
  • Supercoiled DNA allows efficient packaging of genetic material without a nuclear envelope
  • Replication origin (oriC) is where DNA synthesis begins, relevant to understanding bacterial cell division

Plasmids

  • Extrachromosomal DNA exists independently and replicates autonomously from the main chromosome
  • Resistance genes often carried on plasmids confer antibiotic resistance, heavy metal tolerance, or virulence factors
  • Horizontal gene transfer via conjugation allows plasmid sharing between bacteria, accelerating resistance spread in populations

Ribosomes

  • 70S size (composed of 30S and 50S subunits) distinguishes bacterial ribosomes from eukaryotic 80S ribosomes
  • Antibiotic targets—aminoglycosides target 30S, macrolides target 50S, exploiting this size difference for selective toxicity
  • Protein synthesis machinery translates mRNA into proteins essential for all cellular functions

Compare: Nucleoid vs. Plasmids—both contain DNA, but the chromosome carries essential genes while plasmids carry accessory genes that provide selective advantages. Plasmids are the key to understanding how antibiotic resistance spreads horizontally between unrelated bacteria.


Motility and Surface Attachment

These external appendages enable bacteria to move through environments and attach to surfaces or host cells. Motility structures are often the first point of contact in infection and play major roles in chemotaxis and colonization.

Flagella

  • Flagellin protein forms the long, whip-like filament that rotates to propel bacteria through liquid environments
  • Chemotaxis function allows bacteria to swim toward nutrients or away from toxins by reversing flagellar rotation
  • Arrangement patterns—monotrichous (single flagellum), lophotrichous (tuft at one end), peritrichous (distributed around cell)—are used for species identification

Pili

  • Fimbriae are shorter pili that mediate attachment to host tissues, making them critical for initiating infection
  • Sex pilus (F pilus) forms a conjugation bridge for DNA transfer between bacteria during horizontal gene transfer
  • Type IV pili enable twitching motility through extension and retraction, important in biofilm formation

Compare: Flagella vs. Pili—both are surface appendages, but flagella provide swimming motility while pili primarily mediate attachment and DNA transfer. An FRQ about bacterial colonization of host tissues should focus on pili; questions about chemotaxis should focus on flagella.


Metabolic Machinery and Internal Environment

The cytoplasm provides the medium where metabolic reactions occur and houses the molecular machinery for cellular function. This internal environment is where nutrients are processed, proteins are synthesized, and energy is generated.

Cytoplasm

  • Gel-like cytosol contains enzymes, nutrients, ions, and waste products necessary for metabolic reactions
  • No membrane-bound organelles—a defining prokaryotic feature that distinguishes bacteria from eukaryotes
  • Inclusion bodies store nutrients like glycogen, polyphosphate, or sulfur granules for later use

Survival and Dormancy

Some bacteria have evolved remarkable structures that allow them to survive conditions that would kill vegetative cells. Endospore formation represents one of the most extreme survival strategies in the microbial world.

Endospores

  • Dormant structures form in response to nutrient depletion, allowing survival for years or even centuries
  • Extreme resistance to heat, radiation, desiccation, and chemicals due to dipicolinic acid and protective coat layers
  • Clinical significanceClostridium and Bacillus species form endospores, requiring sterilization protocols beyond standard disinfection

Compare: Capsule vs. Endospore—both enhance survival, but capsules protect actively growing cells from immune attack, while endospores allow complete metabolic shutdown to survive environmental extremes. Endospores are not reproductive structures—one cell produces one spore, which germinates into one cell.


Quick Reference Table

ConceptBest Examples
Antibiotic targetsCell wall (peptidoglycan), Ribosomes (70S), Plasma membrane
Virulence factorsCapsule, Pili, Flagella
Horizontal gene transferPlasmids, Pili (sex pilus)
Prokaryotic distinctionsNucleoid (no membrane), 70S ribosomes, No sterols in membrane
Motility structuresFlagella (swimming), Type IV pili (twitching)
Environmental resistanceEndospores, Capsule
Selective permeabilityPlasma membrane, Cell wall
Gram stain differentiationCell wall (peptidoglycan thickness)

Self-Check Questions

  1. Which two structures are both involved in horizontal gene transfer, and what role does each play in the process?

  2. A patient's infection is resistant to penicillin. Which bacterial structure is the normal target of this antibiotic, and which structure likely carries the resistance gene?

  3. Compare and contrast the protective functions of the capsule and endospore—under what circumstances would each provide a survival advantage?

  4. Why do antibiotics that target bacterial ribosomes (like aminoglycosides) not harm human cells? What structural difference makes this selective toxicity possible?

  5. If you were designing an FRQ about bacterial pathogenesis, which three structures would best illustrate how bacteria colonize and evade host defenses? Explain your reasoning.