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🥀Intro to Botany

Common Plant Diseases

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Why This Matters

Plant diseases represent one of the most critical intersections of plant physiology, ecology, and human agriculture you'll encounter in botany. When you understand how pathogens attack plants, you're really demonstrating mastery of vascular transport systems, cellular defense mechanisms, environmental stress responses, and pathogen life cycles. These concepts appear repeatedly on exams because they test whether you can connect microscopic processes to whole-plant symptoms.

Don't just memorize a list of disease names and symptoms—that's the trap. Instead, focus on how each pathogen gains entry, which plant systems it disrupts, and why certain environmental conditions favor infection. When you can explain why root rot kills from the bottom up while vascular wilts cause one-sided dieback, you're thinking like a botanist. That's what earns full credit on free-response questions.


Vascular System Invaders

These diseases attack the plant's internal transport network—the xylem and phloem that move water, nutrients, and sugars. Once a pathogen colonizes vascular tissue, it blocks flow and triggers systemic decline, which is why these diseases are often fatal and difficult to treat.

Fusarium Wilt

  • Soil-borne fungus enters through roots and colonizes xylem vessels—physically blocking water transport and triggering plant defense responses that worsen the clog
  • Symptoms progress from older leaves upward—yellowing and wilting start at the base because lower leaves lose water access first
  • Host-specific strains mean the pathogen affecting tomatoes differs from the one attacking bananas (Fusarium oxysporum f. sp. cubense caused the Panama disease epidemic)

Verticillium Wilt

  • Produces characteristic one-sided or sectional wilting—only part of the plant shows symptoms because the fungus may colonize only certain vascular bundles
  • Persists in soil for 10+ years as microsclerotia—these dormant survival structures make eradication nearly impossible
  • Broad host range spanning 400+ species—unlike host-specific Fusarium, a single Verticillium population can infect vegetables, trees, and ornamentals

Compare: Fusarium Wilt vs. Verticillium Wilt—both are soil-borne fungi that block vascular tissue, but Fusarium is host-specific and starts with lower leaves, while Verticillium has a broad host range and causes asymmetrical symptoms. If an FRQ asks about vascular diseases, use these two to show you understand how pathogen biology affects symptom patterns.


Foliar Fungal Infections

These pathogens attack leaf surfaces and mesophyll tissue, directly interfering with photosynthesis by destroying chloroplasts, blocking light, or causing premature leaf drop. Environmental conditions—especially humidity and air circulation—determine severity.

Powdery Mildew

  • White, powdery mycelium grows on leaf surfaces—unlike most fungi, it thrives in warm, dry conditions with high humidity (not wet leaves)
  • Obligate parasite that doesn't kill host cells immediately—extracts nutrients through specialized structures called haustoria while keeping tissue alive
  • Reduces photosynthetic efficiency by 20-40%—the fungal coating physically blocks light absorption and damages underlying chloroplasts

Downy Mildew

  • Oomycete (water mold), not a true fungus—requires free water on leaf surfaces and cool temperatures to produce zoospores
  • Yellow patches on upper leaf surface with fuzzy gray-purple growth underneath—the "downy" sporangiophores emerge from stomata on the abaxial side
  • Devastated European vineyards in the 1800sPlasmopara viticola introduction from North America changed viticulture permanently

Rust

  • Produces distinctive rust-colored pustules (uredinia) containing spores—these break through the epidermis, creating open wounds
  • Complex life cycles may require two different host species—wheat rust alternates between wheat and barberry, which is why barberry eradication programs existed
  • Reduces photosynthesis and causes premature senescence—heavy infections can decrease crop yields by 20-50%

Compare: Powdery Mildew vs. Downy Mildew—both cause leaf discoloration, but powdery mildew is a true fungus favoring dry conditions with surface growth, while downy mildew is an oomycete requiring wet conditions with growth emerging from stomata. This distinction tests whether you understand pathogen biology, not just symptoms.

Leaf Spot

  • Discrete lesions with defined margins—often shows concentric rings or "target spots" as the infection expands outward from the initial penetration point
  • Caused by diverse pathogens including Alternaria, Septoria, and bacterial species—diagnosis requires examining spore morphology or culturing
  • Premature defoliation reduces carbohydrate storage—plants lose the ability to photosynthesize and build reserves for next season's growth

Tissue Destruction Diseases

These pathogens cause rapid, aggressive breakdown of plant tissue through enzymatic degradation of cell walls and production of toxins. They often spread quickly under favorable conditions and can destroy entire crops within days.

Blight (Early and Late)

  • Early blight (Alternaria solani) creates target-shaped lesions on older leaves first—the fungus is a weak pathogen that attacks stressed or aging tissue
  • Late blight (Phytophthora infestans) causes water-soaked lesions that spread explosively—this oomycete caused the Irish Potato Famine and remains agriculture's most destructive plant disease
  • Late blight requires cool, wet conditions and can destroy a field in 7-10 days—spores travel miles on wind, making regional epidemics possible

Fire Blight

  • Bacterial disease (Erwinia amylovora) causing scorched appearance—infected shoots bend into a characteristic "shepherd's crook" shape
  • Enters through flowers and wounds, spreads through vascular tissue—bacteria produce enzymes that destroy cell walls and a sticky ooze containing millions of new bacteria
  • Can kill mature apple and pear trees within a single season—the only bacterial disease on this list, requiring different management than fungal infections

Compare: Late Blight vs. Fire Blight—both cause rapid, devastating tissue death, but late blight is an oomycete affecting solanaceous crops in cool wet weather, while fire blight is a bacterium affecting rosaceous trees that spreads during warm, wet flowering periods. Know the pathogen type—it determines whether fungicides or antibiotics are appropriate.


Root and Crown Diseases

These pathogens attack below ground, destroying the root system's ability to absorb water and anchor the plant. Symptoms appear above ground as wilting and yellowing, but the real damage is hidden in the soil.

Root Rot

  • Caused by oomycetes (Phytophthora, Pythium) and true fungi (Rhizoctonia)—waterlogged, poorly-drained soils create anaerobic conditions that favor these pathogens
  • Roots turn brown/black and mushy with characteristic foul odor—healthy white roots become non-functional, unable to absorb water even when soil is saturated
  • Above-ground symptoms mimic drought stress—wilting despite wet soil is the key diagnostic clue that roots are compromised

Compare: Root Rot vs. Vascular Wilts—both cause wilting, but root rot destroys the absorption system (roots appear decayed, soil is often waterlogged), while vascular wilts block the transport system (roots look healthy, vascular tissue shows brown streaking when cut). This distinction is critical for diagnosis and management.


Viral Diseases

Viruses hijack plant cellular machinery to replicate, disrupting normal gene expression and protein synthesis. Unlike fungi and bacteria, viruses cannot be "killed" with pesticides—management focuses entirely on prevention.

Mosaic Virus

  • Causes distinctive mottled light/dark green patterns on leaves—the virus interferes with chloroplast development, creating patches of reduced chlorophyll
  • Transmitted by aphid vectors in a non-persistent manner—aphids acquire and transmit the virus within seconds of probing, making insecticide timing nearly impossible
  • No cure exists once plants are infected—infected plants become permanent virus reservoirs and must be removed to protect healthy neighbors

Compare: Mosaic Virus vs. Fungal Leaf Diseases—both cause leaf discoloration, but viral mosaics show systemic mottling patterns throughout the plant with no visible pathogen structures, while fungal diseases produce localized lesions with spores or mycelium visible under magnification. If an exam shows a photo, look for the pattern: random mottling = virus; discrete spots = likely fungal.


Quick Reference Table

ConceptBest Examples
Vascular system blockageFusarium Wilt, Verticillium Wilt
Photosynthesis reductionPowdery Mildew, Rust, Leaf Spot
Oomycete pathogens (not true fungi)Downy Mildew, Late Blight, Root Rot (Phytophthora)
Soil-borne persistenceVerticillium Wilt, Fusarium Wilt, Root Rot
Vector-transmitted diseasesMosaic Virus (aphids)
Bacterial plant diseasesFire Blight
Environmental trigger: wet conditionsLate Blight, Downy Mildew, Root Rot
Environmental trigger: humidity without leaf wetnessPowdery Mildew

Self-Check Questions

  1. Both Fusarium Wilt and Verticillium Wilt attack the vascular system—what key difference in their symptom patterns reflects their different colonization strategies?

  2. You observe a plant with wilting leaves despite wet soil. How would you determine whether the cause is root rot or a vascular wilt disease?

  3. Compare and contrast Powdery Mildew and Downy Mildew: What environmental conditions favor each, and why does this difference reflect their distinct biology?

  4. A farmer asks whether to apply fungicide to plants showing mosaic leaf patterns. What would you tell them, and why does pathogen type matter for management decisions?

  5. Late Blight and Fire Blight both cause rapid tissue death, but they require completely different management approaches. Explain why, referencing the pathogen type and transmission method for each.