Enzymes are the workhorses of our cells, speeding up reactions. But they need control. This section dives into how cells regulate enzymes through inhibition and other mechanisms, keeping our biochemical processes in check.
We'll explore different types of enzyme inhibition, from competitive to irreversible. We'll also look at regulation methods like allosteric control and covalent changes. Understanding these helps us grasp how cells fine-tune their chemistry.
Enzyme Inhibition Types
Competitive and Noncompetitive Inhibition
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Competitive inhibition occurs when inhibitor molecules bind to enzyme's active site
Inhibitors structurally resemble substrate molecules
Compete with substrates for binding to active site
Decreases apparent affinity of enzyme for substrate
Can be overcome by increasing substrate concentration
Noncompetitive inhibition involves inhibitor binding to allosteric site
Allosteric site located away from active site
Binding causes conformational change in enzyme
Reduces enzyme's catalytic activity
Cannot be overcome by increasing substrate concentration
Kinetic differences between competitive and noncompetitive inhibition
Competitive inhibition affects Km (Michaelis constant) but not Vmax
Noncompetitive inhibition affects Vmax but not Km
Examples of competitive inhibitors include sulfa drugs (antibiotics)
Examples of noncompetitive inhibitors include heavy metals (mercury, lead)
Uncompetitive and Reversible Inhibition
Uncompetitive inhibition involves inhibitor binding only to enzyme-substrate complex
Prevents product formation
Decreases both Km and Vmax
Rare in nature but important in drug design
Reversible inhibition allows inhibitor to dissociate from enzyme
Enzyme activity can be restored
Includes competitive, noncompetitive, and uncompetitive inhibition
Inhibition strength depends on inhibitor concentration
Ki (inhibition constant) measures inhibitor's affinity for enzyme
Smaller Ki indicates stronger inhibition
Used to compare effectiveness of different inhibitors
Calculated using enzyme kinetics experiments
Examples of uncompetitive inhibitors include methotrexate (cancer treatment)
Examples of reversible inhibitors include acetylcholinesterase inhibitors (Alzheimer's treatment)
Irreversible Inhibition and Enzyme Inactivation
Irreversible inhibition permanently inactivates enzyme
Inhibitor forms covalent bond with enzyme
Often targets specific amino acid residues in active site
Enzyme activity cannot be restored
Mechanism-based inhibitors (suicide inhibitors)
Initially bind as substrates
Enzyme converts inhibitor to reactive intermediate
Reactive intermediate forms covalent bond with enzyme
Irreversible inhibitors often used as drugs or pesticides
Require lower doses than reversible inhibitors
Can have long-lasting effects
Examples of irreversible inhibitors include aspirin (COX inhibitor) and organophosphates (nerve agents)
Enzyme Regulation Mechanisms
Allosteric Regulation and Feedback Inhibition
Allosteric regulation involves binding of effector molecules to allosteric sites
Allosteric sites distinct from active site
Effectors can be activators or inhibitors
Binding causes conformational change in enzyme
Alters enzyme's affinity for substrate or catalytic efficiency
Cooperativity in allosteric enzymes
Binding of one substrate molecule affects binding of subsequent molecules
Positive cooperativity increases enzyme's affinity for substrate
Negative cooperativity decreases enzyme's affinity for substrate
Feedback inhibition regulates metabolic pathways
End product of pathway inhibits earlier enzyme in pathway
Prevents overproduction of metabolites
Conserves energy and resources
Examples of allosteric enzymes include hemoglobin (oxygen binding)
Examples of feedback inhibition include cholesterol biosynthesis pathway
Covalent Modification and Zymogen Activation
Covalent modification alters enzyme activity through chemical changes
Common modifications include phosphorylation, acetylation, and methylation
Enzymes responsible for modifications called kinases (phosphorylation)
Enzymes removing modifications called phosphatases (dephosphorylation)
Can activate or inhibit enzyme activity
Allows rapid and reversible regulation
Zymogen activation involves conversion of inactive precursor to active enzyme
Zymogens (proenzymes) synthesized in inactive form
Activation occurs through proteolytic cleavage
Prevents premature enzyme activity
Common in digestive enzymes and blood clotting factors
Regulation of enzyme activity through protein-protein interactions
Binding of regulatory proteins can activate or inhibit enzymes
Allows integration of multiple signaling pathways
Examples of covalent modification include glycogen metabolism (phosphorylation of glycogen synthase and phosphorylase)
Examples of zymogens include trypsinogen (precursor to trypsin) and pepsinogen (precursor to pepsin)