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Biochemistry

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13.1 Overview and Steps of the Citric Acid Cycle

Last Updated on August 9, 2024

The citric acid cycle is a crucial metabolic pathway that breaks down acetyl-CoA, producing energy and important molecules. It involves a series of reactions that release carbon dioxide, generate ATP, and create reduced electron carriers like NADH and FADH2.

This cycle is a key part of cellular respiration, connecting glycolysis to the electron transport chain. It occurs in the mitochondrial matrix of eukaryotes and the cytoplasm of prokaryotes, playing a vital role in energy production for cells.

Citric Acid Cycle Overview

Acetyl-CoA and Initial Reactions

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  • Acetyl-CoA enters the citric acid cycle as a two-carbon molecule
  • Acetyl-CoA combines with oxaloacetate (four-carbon molecule) to form citrate (six-carbon molecule)
  • Citrate synthase catalyzes the condensation reaction between acetyl-CoA and oxaloacetate
  • This reaction marks the first step of the citric acid cycle
  • Citrate synthase releases coenzyme A and produces citrate

Carbon Dioxide Release and Energy Production

  • The citric acid cycle releases two molecules of CO2 per acetyl-CoA
  • CO2 release occurs during oxidative decarboxylation steps
  • The cycle produces energy in the form of GTP (guanosine triphosphate)
  • GTP can be converted to ATP through substrate-level phosphorylation
  • The cycle also generates reduced electron carriers (NADH and FADH2)

Cycle Completion and Regeneration

  • Oxaloacetate regenerates at the end of each cycle
  • Regenerated oxaloacetate can combine with another acetyl-CoA molecule
  • This regeneration allows the cycle to continue indefinitely
  • The cycle occurs in the mitochondrial matrix of eukaryotic cells
  • Prokaryotes perform the citric acid cycle in their cytoplasm

Oxidative Decarboxylation Steps

Isocitrate Dehydrogenase Reaction

  • Isocitrate dehydrogenase catalyzes the oxidative decarboxylation of isocitrate
  • This reaction converts isocitrate to α-ketoglutarate
  • The process releases one molecule of CO2
  • Simultaneously produces one molecule of NADH
  • Isocitrate dehydrogenase requires NAD+ as a cofactor

α-Ketoglutarate Dehydrogenase Complex

  • α-Ketoglutarate dehydrogenase complex catalyzes the next oxidative decarboxylation
  • Converts α-ketoglutarate to succinyl-CoA
  • Releases the second molecule of CO2 in the cycle
  • Generates another molecule of NADH
  • Requires thiamine pyrophosphate, lipoic acid, and NAD+ as cofactors

NADH Production and Electron Transport Chain

  • The citric acid cycle produces a total of three NADH molecules per acetyl-CoA
  • NADH serves as a high-energy electron carrier
  • Transfers electrons to the electron transport chain
  • Electron transport chain uses these electrons for ATP production via oxidative phosphorylation
  • Each NADH can lead to the production of approximately 2.5 ATP molecules

Regeneration of Oxaloacetate

Succinyl-CoA to Succinate Conversion

  • Succinyl-CoA synthetase catalyzes the conversion of succinyl-CoA to succinate
  • This reaction produces GTP through substrate-level phosphorylation
  • GTP can be converted to ATP by nucleoside diphosphate kinase
  • Succinyl-CoA synthetase requires ADP or GDP as a phosphate acceptor
  • This step marks the only substrate-level phosphorylation in the citric acid cycle

Succinate Oxidation and FADH2 Production

  • Succinate dehydrogenase oxidizes succinate to fumarate
  • This reaction reduces FAD to FADH2
  • Succinate dehydrogenase anchored in the inner mitochondrial membrane
  • FADH2 transfers electrons directly to the electron transport chain
  • Each FADH2 leads to the production of approximately 1.5 ATP molecules

Final Steps and Oxaloacetate Formation

  • Fumarase catalyzes the hydration of fumarate to malate
  • Malate dehydrogenase oxidizes malate to oxaloacetate
  • This final step produces another molecule of NADH
  • Regenerated oxaloacetate can combine with a new acetyl-CoA to restart the cycle
  • Malate dehydrogenase requires NAD+ as a cofactor