key term - Boc-Lys(Z)-OH

Definition

Boc-Lys(Z)-OH is a protected amino acid used in the synthesis of peptides. It consists of a lysine residue with a tert-butyloxycarbonyl (Boc) protecting group on the α-amino group and a benzyloxycarbonyl (Z) protecting group on the ε-amino group of the lysine side chain. This protected amino acid is an important building block in the step-wise construction of more complex peptide sequences.

5 Must Know Facts For Your Next Test

1. The Boc group is a base-labile protecting group that can be removed under acidic conditions, such as treatment with trifluoroacetic acid (TFA).
2. The Z group is an acid-labile protecting group that can be removed by catalytic hydrogenation or treatment with HBr/AcOH.
3. Boc-Lys(Z)-OH is commonly used in solid-phase peptide synthesis, where it is attached to a resin support and elongated with additional amino acids to build the desired peptide sequence.
4. The protected lysine residue in Boc-Lys(Z)-OH ensures that only the α-amino group is available for peptide bond formation, while the ε-amino group remains protected to prevent unwanted side reactions.
5. Boc-Lys(Z)-OH is a versatile building block that can be incorporated into a wide range of peptide sequences, allowing for the introduction of a lysine residue with orthogonal protecting groups.

Review Questions

• Explain the purpose of the Boc and Z protecting groups in Boc-Lys(Z)-OH and how they are used in peptide synthesis.
  • The Boc and Z protecting groups in Boc-Lys(Z)-OH serve to selectively protect the α-amino group and ε-amino group of the lysine residue, respectively. This allows for the controlled addition of amino acids during peptide synthesis, ensuring that only the α-amino group is available for peptide bond formation, while the ε-amino group remains protected to prevent unwanted side reactions. The Boc group can be removed under acidic conditions, such as treatment with trifluoroacetic acid (TFA), while the Z group can be removed by catalytic hydrogenation or treatment with HBr/AcOH. This orthogonal protection strategy is crucial in the step-wise construction of complex peptide sequences.
• Describe the role of Boc-Lys(Z)-OH in solid-phase peptide synthesis and how it contributes to the synthesis of larger peptides.
  • Boc-Lys(Z)-OH is an important building block in solid-phase peptide synthesis, where it is attached to a resin support and elongated with additional amino acids to build the desired peptide sequence. The protected lysine residue in Boc-Lys(Z)-OH ensures that only the α-amino group is available for peptide bond formation, while the ε-amino group remains protected. This allows for the introduction of a lysine residue at specific positions within the peptide chain, enabling the incorporation of functional groups or the attachment of additional moieties, such as fluorescent labels or affinity tags. The ability to selectively protect and deprotect the amino and side-chain groups of Boc-Lys(Z)-OH is crucial for the step-wise construction of more complex peptide sequences.
• Analyze the versatility of Boc-Lys(Z)-OH and its applications in the synthesis of diverse peptide structures.
  • Boc-Lys(Z)-OH is a highly versatile building block in peptide synthesis due to the orthogonal protecting groups on the lysine residue. The Boc and Z groups can be selectively removed under different conditions, allowing for the introduction of the lysine residue at various stages of the peptide synthesis. This versatility enables the incorporation of Boc-Lys(Z)-OH into a wide range of peptide sequences, facilitating the synthesis of diverse peptide structures. The protected lysine residue can serve as a point of attachment for additional functional groups, labels, or other moieties, expanding the potential applications of the synthesized peptides in areas such as drug development, protein engineering, and analytical techniques. The ability to control the reactivity of the lysine side chain through the use of Boc-Lys(Z)-OH is a crucial aspect of its utility in the construction of complex peptide-based molecules.

Related terms

Protecting Group:

A temporary substituent attached to a reactive functional group in a molecule to prevent undesired reactions during a chemical transformation.

Peptide Synthesis: The process of assembling amino acids in a specific order to form a peptide or protein chain.

Lysine:

A basic, positively charged amino acid with a long aliphatic side chain and a terminal ε-amino group.