6.3 Applications and limitations of the Alexander polynomial

3 min readjuly 22, 2024

The is a powerful tool in knot theory, helping us tell different knots apart. It's calculated using knot diagrams and has cool properties like being for connected sums. This makes it super useful for studying knots and links.

But it's not perfect. Some different knots can have the same Alexander polynomial, and it can't tell apart a knot from its mirror image. Still, it's connected to other important concepts in knot theory and has real-world applications in biology, physics, and chemistry.

Applications and Properties of the Alexander Polynomial

Alexander polynomial for knot distinction

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  • Powerful knot invariant distinguishes between different knots and links
    • Different Alexander polynomials prove knots are distinct ( Δ(t)=t2t+1\Delta(t) = t^2 - t + 1, Δ(t)=t23t+1\Delta(t) = t^2 - 3t + 1)
  • Calculated using knot diagram and determinant formula
    • Independent of chosen diagram for a given knot, making it well-defined invariant
  • Multiplicative under operation
    • Connected sum K1#K2K_1 \# K_2 has Alexander polynomial ΔK1#K2(t)=ΔK1(t)ΔK2(t)\Delta_{K_1 \# K_2}(t) = \Delta_{K_1}(t) \cdot \Delta_{K_2}(t)
  • Distinguishes between different links
    • Links with different numbers of components have different Alexander polynomials ( Δ(t)=t1/2t1/2\Delta(t) = t^{1/2} - t^{-1/2}, Δ(t)=0\Delta(t) = 0)

Limitations of Alexander polynomial

  • Not a complete invariant, distinct knots can have same Alexander polynomial
    • and both have Δ(t)=1\Delta(t) = 1 but are distinct
  • Cannot detect of a knot
    • Knot and its mirror image have same Alexander polynomial (right-handed and left-handed trefoil knots Δ(t)=t2t+1\Delta(t) = t^2 - t + 1)
  • Does not provide information about genus of a knot
    • Knots with different genera can have same Alexander polynomial
  • Cannot detect of a knot
    • Minimum number of crossings changed to transform knot into unknot
    • Knots with different unknotting numbers can have same Alexander polynomial

Alexander polynomial vs other invariants

  • Related to , another important knot invariant
    • Jones polynomial obtained from Alexander polynomial by variable substitution and normalization
    • Jones polynomial is stronger invariant, can distinguish knots with same Alexander polynomial
  • Connected to , fundamental group of knot complement
    • Alexander polynomial derived from , obtained from presentation of knot group
    • Knot group contains more information than Alexander polynomial but more difficult to compute and compare
  • Related to of a knot, another numerical invariant
    • Signature obtained from Alexander polynomial by evaluating at t=1t = -1
    • Signature provides information about cobordism class of the knot

Applications of Alexander polynomial

  • Biology: studies topology of DNA molecules
    • DNA forms knots and links during replication and recombination
    • Classifies and distinguishes different DNA knot types
    • Analyzes knotting probability and complexity of DNA in viral capsids
  • Physics: appears in and
    • Quantum generalize classical knot polynomials (Alexander and Jones) in quantum mechanics context
    • Related to , describes behavior of knots and links in 3D space
  • Chemistry: applications in and links
    • Molecules (, ) exhibit non-trivial topological structures described using knot theory
    • Characterizes and distinguishes different molecular knot types
    • Studies synthesis and properties of molecular (link of three interlocked rings)

Key Terms to Review (25)

Alexander Matrix: The Alexander matrix is a mathematical construct used in knot theory that helps in the computation of the Alexander polynomial, which is an invariant of knots and links. This matrix is derived from a presentation of the knot or link as a planar diagram, and its determinants provide critical insights into the knot's properties, connecting it to various applications, computational techniques, and foundational aspects of the Alexander polynomial.
Alexander polynomial: The Alexander polynomial is a knot invariant, which is a polynomial that helps distinguish between different types of knots. It is defined for a knot or link by considering a Seifert surface and applying algebraic techniques to the fundamental group of the knot complement. This polynomial can reveal important properties about knots, such as their orientation and chirality, as well as provide insights into their classification and computational methods.
Biological applications: Biological applications refer to the use of knot theory concepts and techniques in understanding biological structures and processes, particularly in molecular biology. This area explores how knots and links appear in DNA, proteins, and other biological macromolecules, contributing to our understanding of their functions, interactions, and stability.
Borromean Rings: Borromean rings are a set of three linked circles in which no two circles are directly linked; removing any one ring causes the other two to become unlinked. This unique configuration illustrates important concepts in knot theory and serves as a classic example of multi-component links, showcasing how links can exist in a complex relationship without being interdependent.
Catenanes: Catenanes are molecules consisting of two or more interlinked rings, similar to chain links. These structures are significant in various fields, particularly in understanding complex topologies and how they relate to properties like stability and functionality. Their formation and behavior provide insights into molecular interactions and dynamics, making them essential in studies of knot theory and applications in biological systems.
Chern-Simons Theory: Chern-Simons theory is a topological quantum field theory that associates a mathematical structure to three-dimensional manifolds. It plays a crucial role in understanding the relationships between knots, links, and the properties of gauge fields, providing insights into both mathematical physics and topology.
Chirality: Chirality refers to the property of an object that is not superimposable on its mirror image, meaning that the two forms cannot be aligned perfectly despite being similar. This concept is crucial in knot theory, as it helps distinguish between different types of knots and links by analyzing their symmetries and configurations. Understanding chirality is essential for applying invariants like the Alexander polynomial and investigating the role of knot groups in classification.
Connected Sum: The connected sum is a mathematical operation used in topology that combines two manifolds into a single manifold by removing a disk from each and gluing the resulting boundary circles together. This operation is particularly significant in knot theory, where it allows for the construction of new knots and links from existing ones, showcasing how complex topological structures can be formed from simpler components.
Conway Knot: The Conway knot is a particular type of non-trivial knot that is notable for its unique structure and properties. It serves as an important example in knot theory, especially when examining polynomial invariants like the Alexander and Jones polynomials, which are used to distinguish knots and analyze their characteristics. Understanding the Conway knot helps in exploring relationships between various polynomial invariants, revealing deeper insights into the complexities of knots.
Figure-eight knot: The figure-eight knot is a type of knot commonly used in climbing, sailing, and rescue operations. It is known for its simplicity and reliability, providing a secure loop at the end of a rope, and it plays an essential role in understanding various aspects of knot theory.
Hopf Link: The Hopf link is a classic example of a two-component link in knot theory that consists of two circles that are linked together in a specific way, where each circle winds around the other. This link serves as a foundational example for understanding more complex links and their properties, while also playing a significant role in various polynomial invariants and fundamental group studies.
Jones Polynomial: The Jones polynomial is a significant knot invariant that assigns to each oriented knot or link a polynomial in one variable, often denoted as $V(t)$. It captures essential information about the knot's topology and is derived using a particular method involving knot diagrams and the Kauffman bracket, providing a deeper understanding of knot theory.
Kinoshita-Terasaka knot: The Kinoshita-Terasaka knot is a specific type of prime knot that is known for its complex structure and unique properties, notably recognized as a non-trivial example of a knot that cannot be simplified into a more basic form. This knot is significant in the study of polynomial invariants, especially in exploring the relationships between different types of polynomial invariants, such as the Alexander and Jones polynomials, which can reveal insights about the knot's characteristics and behavior under various transformations.
Knot group: A knot group is the fundamental group of the complement of a knot in three-dimensional space, capturing important topological information about the knot itself. It helps in understanding the properties and behavior of knots, revealing relationships between different knots and their structures. Knot groups are often studied through presentations such as Wirtinger presentations, which express the group in terms of generators and relations derived from a knot diagram.
Knot invariants: Knot invariants are properties of knots that remain unchanged under ambient isotopies, which means they can help us determine whether two knots are equivalent. They play a crucial role in classifying knots and understanding their structure, and they are used extensively in various aspects of knot theory including diagrams, projections, and mathematical proofs.
Molecular knots: Molecular knots refer to complex structures formed by interlaced polymer chains, resembling traditional mathematical knots. These knots can impact the physical properties and functionalities of molecules, making them significant in various scientific fields, including chemical topology and biochemistry. The study of molecular knots is crucial for understanding how molecular structure affects behavior, stability, and reactivity in different environments.
Multiplicative: In the context of knot theory, 'multiplicative' refers to a property related to how certain invariants, such as the Alexander polynomial, behave when considering the connected sum of knots. Specifically, if you have two knots, the multiplicative property implies that the Alexander polynomial of their connected sum is the product of their individual Alexander polynomials. This concept is crucial when analyzing how knot invariants interact and what they reveal about the structure of knots.
Non-invariant: In knot theory, a non-invariant refers to a property or characteristic of a knot that can change under certain operations, such as knot manipulations or deformations. This means that if you apply specific transformations to the knot, its non-invariant properties may not remain consistent or unchanged, making them less useful for distinguishing between different knots or knot types.
Quantum knot invariants: Quantum knot invariants are mathematical objects derived from quantum mechanics that classify knots in a way that is sensitive to their topology. They provide a bridge between the realms of quantum physics and knot theory, offering new techniques for distinguishing knots and links beyond classical invariants like the Alexander polynomial. These invariants often arise from quantum field theories and have applications in understanding the structure of three-dimensional spaces.
Rotaxanes: Rotaxanes are complex molecular structures consisting of a linear molecule, known as the axle, that is threaded through a cyclic molecule, referred to as the ring. This unique arrangement allows for interesting mechanical properties and makes rotaxanes valuable in various applications, particularly in the development of molecular machines and nanotechnology.
Signature: In knot theory, the signature of a knot is an integer that serves as a topological invariant, providing information about the knot's structure. Specifically, it is calculated from a Seifert surface associated with the knot and represents the difference between the number of positive and negative crossings in a diagram of the knot. The signature can be used to distinguish knots, as it is one of the properties that remains unchanged under ambient isotopy.
Topological quantum field theories: Topological quantum field theories (TQFTs) are mathematical frameworks that connect quantum mechanics and topology, allowing physicists to study topological properties of spaces through quantum fields. These theories reveal how quantum states behave under continuous deformations and highlight the significance of topological invariants, particularly in understanding knot theory and its applications. TQFTs find essential roles in analyzing phenomena in condensed matter physics and quantum gravity.
Trefoil Knot: A trefoil knot is the simplest nontrivial knot, resembling a three-looped configuration. It serves as a fundamental example in knot theory, illustrating key concepts such as knot diagrams, crossing numbers, and polynomial invariants, while also appearing in various applications across mathematics and science.
Unknotting number: The unknotting number of a knot is the minimum number of crossings that must be removed to transform the knot into an unknot, which is simply a loop without any twists or crossings. Understanding the unknotting number is essential for classifying knots and connects directly to various properties like crossing numbers and bridge numbers, as well as the concepts of slice genus and computational methods in knot theory.
Unlink: In knot theory, an unlink refers to a collection of disjoint circles in three-dimensional space that can be separated without any crossings or entanglements. This concept is crucial for understanding how knots and links behave, particularly when analyzing the relationships between different components in a link and how they interact with various polynomial invariants.
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