7.2 Soil Organic Matter: Composition, Decomposition, and Humification

2 min readjuly 24, 2024

Soil organic matter is the heart of healthy soil ecosystems. It's a complex mix of decomposed plant and animal residues, living organisms, and stable . These components work together to improve soil structure, , and water retention.

Decomposition transforms fresh organic matter into humic substances through microbial processes. This ongoing cycle supports soil health, enhances nutrient availability, and even helps mitigate climate change by sequestering carbon in stable forms.

Soil Organic Matter: Composition and Processes

Components of soil organic matter

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  • Soil organic matter (SOM) forms complex mixture derived from decomposed plant and animal residues
  • Fresh organic residues comprise undecomposed plant litter and animal remains
  • Partially decomposed organic matter undergoes microbial breakdown
  • Humus consists of stable, complex organic compounds resistant to further decomposition
  • Living soil organisms include diverse microbes (bacteria, fungi) and fauna (protozoa, nematodes)
  • Carbon serves as primary element in SOM structure
  • Nitrogen, phosphorus, and sulfur contribute essential nutrients
  • Trace elements play minor but crucial roles in soil chemistry

Process of decomposition

  • Fragmentation breaks down organic materials into smaller pieces increasing surface area
  • Leaching removes soluble compounds from organic matter
  • Catabolism by soil organisms breaks down complex molecules into simpler forms
  • Temperature influences decomposition rate with higher temps accelerating microbial activity
  • Moisture affects decomposition optimal levels (50-60% water-filled pore space) enhance microbial processes
  • Oxygen availability promotes faster decomposition in aerobic conditions
  • Soil pH impacts decomposition neutral to slightly acidic (pH 6-7) favors microbial activity
  • C:N ratio determines decomposition speed lower ratios (< 20:1) lead to faster breakdown
  • Soil texture and structure affect oxygen and water availability clay soils may slow decomposition

Formation of humic substances

  • Humification transforms organic matter into stable humus through microbial processes
  • Degradation of plant and animal residues initiates humic substance formation
  • Microbial synthesis produces new compounds contributing to humic structure
  • Polymerization and condensation reactions create complex molecular structures
  • Humic acids dissolve in alkaline solutions play role in nutrient chelation
  • Fulvic acids show solubility in both acidic and alkaline solutions enhance nutrient uptake
  • Humin represents insoluble fraction contributes to soil structure stability
  • High molecular weight characterizes humic substances ranging from 2,000 to 300,000 Da
  • Complex aromatic structures provide stability and resistance to degradation
  • Numerous functional groups (carboxyl, phenolic) enable diverse chemical interactions

Importance for soil health

  • Soil structure improves through enhanced aggregation and increased porosity
  • Nutrient cycling enhances as SOM acts as reservoir slowly releasing nutrients
  • increases improving nutrient retention (Ca²⁺, Mg²⁺, K⁺)
  • pH buffering helps maintain stable soil conditions crucial for plant growth
  • Water retention improves reducing runoff and erosion risks
  • Microbial habitat supports diverse soil ecosystem enhancing nutrient cycling
  • mitigates climate change by storing atmospheric CO₂
  • Contaminant immobilization reduces bioavailability of heavy metals and organic pollutants

Key Terms to Review (18)

Aerobic decomposition: Aerobic decomposition is the process by which organic matter is broken down by microorganisms in the presence of oxygen, resulting in the release of carbon dioxide, water, and energy. This type of decomposition is crucial for nutrient cycling in ecosystems, as it transforms complex organic materials into simpler compounds that can be utilized by plants and other organisms. The efficiency of aerobic decomposition is influenced by factors like temperature, moisture, and the composition of the organic matter.
Aggregates formation: Aggregates formation refers to the process where individual soil particles, such as sand, silt, and clay, cluster together to form larger, stable structures known as aggregates. These aggregates play a crucial role in soil health by improving aeration, water retention, and nutrient availability, which are essential for plant growth and microbial activity.
Anaerobic decomposition: Anaerobic decomposition is the process by which organic matter breaks down in the absence of oxygen, primarily carried out by anaerobic microorganisms. This process is significant for recycling nutrients back into the ecosystem, contributing to the formation of soil organic matter and influencing the overall health of soil. In environments such as wetlands or landfills, anaerobic decomposition produces gases like methane, which can have important implications for climate change and energy production.
Animal manures: Animal manures are organic waste products derived from livestock, including excrement, bedding, and any residual feed. These materials are rich in essential nutrients like nitrogen, phosphorus, and potassium, making them valuable for enhancing soil fertility and promoting plant growth. Their decomposition and integration into the soil contribute significantly to soil organic matter and its overall health.
Carbon sequestration: Carbon sequestration is the process of capturing and storing atmospheric carbon dioxide (CO2) to mitigate climate change and its impacts. This process can occur naturally through biological mechanisms, such as photosynthesis in plants and soil organic matter formation, or through engineered solutions that involve capturing CO2 from industrial sources and storing it underground. Carbon sequestration plays a crucial role in the global carbon cycle and influences climate change by reducing the concentration of greenhouse gases in the atmosphere.
Cation Exchange Capacity: Cation exchange capacity (CEC) refers to the ability of soil to hold and exchange positively charged ions, or cations, such as calcium, magnesium, and potassium. This capacity is crucial for soil fertility and nutrient availability, influencing how well plants can access essential nutrients and how pollutants may be retained or leached through soil and water systems.
Humus: Humus is the dark, organic component of soil that is formed from the decomposition of plant and animal matter. It plays a crucial role in enhancing soil fertility, structure, and moisture retention, thus significantly contributing to the overall health of ecosystems.
Lignin degradation: Lignin degradation refers to the biochemical process by which lignin, a complex organic polymer found in the cell walls of plants, is broken down by microorganisms into simpler compounds. This process is crucial for nutrient cycling and soil health as it contributes to the formation of soil organic matter through decomposition and humification.
Loss on Ignition: Loss on ignition (LOI) is a method used to quantify the amount of organic matter and moisture present in a sample, typically soil or sediment, by determining the weight change that occurs when the sample is heated to high temperatures. This process effectively combusts organic matter and releases water, providing insights into the composition and stability of soil organic matter, which plays a critical role in nutrient cycling and soil health.
Microbial biomass: Microbial biomass refers to the total mass of microorganisms in a given volume of soil or other environments, playing a crucial role in soil health and nutrient cycling. This biomass comprises bacteria, fungi, archaea, and other microorganisms that contribute to the breakdown of organic matter, transforming it into forms usable by plants and other organisms. The amount and composition of microbial biomass influence soil fertility, the decomposition process, and overall ecosystem function.
NMR Spectroscopy: NMR spectroscopy, or Nuclear Magnetic Resonance spectroscopy, is an analytical technique used to determine the structure, dynamics, and environment of molecules by observing the magnetic properties of atomic nuclei. In the context of soil organic matter, NMR spectroscopy provides insights into the composition and transformations of organic compounds during processes like decomposition and humification, which are vital for understanding soil health and fertility.
Nutrient Cycling: Nutrient cycling refers to the process by which essential nutrients move through the biotic and abiotic components of an ecosystem, allowing for their continuous availability and utilization by organisms. This process involves various transformations and pathways that ensure nutrients, such as nitrogen and sulfur, are recycled through biological, geological, and chemical interactions, thus supporting life and maintaining ecosystem health.
Plant residues: Plant residues refer to the remains of plants, including leaves, stems, roots, and other organic materials left over after the plant has died or been harvested. These residues are essential components of soil organic matter and play a crucial role in nutrient cycling, improving soil structure, and enhancing soil fertility.
R. A. Anderson: R. A. Anderson is a prominent figure in environmental chemistry, known for his work on soil organic matter and its role in ecosystem processes. His research focuses on understanding the composition, decomposition, and humification of organic matter in soils, which is crucial for nutrient cycling and soil health. Anderson's contributions have significantly advanced the knowledge of how organic materials break down and interact within soil systems.
Soil erosion prevention: Soil erosion prevention refers to the practices and strategies implemented to protect soil from being removed or degraded by wind, water, and human activities. Effective prevention methods maintain soil structure, enhance organic matter content, and support the overall health of ecosystems, which is crucial for sustainable land use and agriculture.
Soil fertility: Soil fertility refers to the ability of soil to provide essential nutrients and support plant growth. It involves a combination of physical, chemical, and biological properties that influence how well plants can thrive in a given area. Soil fertility is impacted by various factors including nutrient availability, organic matter content, and the presence of microorganisms, which are all crucial for healthy plant development.
Temperature effects: Temperature effects refer to the influence that temperature variations have on the physical and biological processes in soil, particularly regarding organic matter. These effects play a crucial role in decomposition rates, microbial activity, and the overall dynamics of soil organic matter, which are vital for nutrient cycling and soil health.
Walter C. Wilcox: Walter C. Wilcox is an influential figure in environmental chemistry known for his extensive research on soil organic matter, particularly its composition, decomposition processes, and humification. His work has provided insights into the importance of organic matter in soil fertility, nutrient cycling, and the overall health of ecosystems, emphasizing the role of microbial activity in the breakdown of organic materials.
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