Skills you’ll gain in this topic:
- Identify key elements in biological molecules (C, H, N, O, P, S) and their importance.
- Explain carbon’s unique bonding capabilities and its role in complex molecules.
- Discuss how different molecular structures lead to diverse biological functions.
- Recognize elements essential for building proteins, lipids, and nucleic acids.
- Relate these elements to the formation of cells and tissues.

Matter, Atoms, and Elements
Organisms are made up of matter, which takes up space and has mass. Matter is made up of tiny particles called atoms, which are made up of even smaller particles called protons, neutrons, and electrons.
Important: Carbon, hydrogen, and oxygen are the MOST PREVALENT elements used to build biological molecules. These three elements form the backbone of all major macromolecules necessary for life.
Basic Structure:
- Atoms = the building blocks of all matter
- Subatomic particles = protons (positive charge), neutrons (neutral charge), and electrons (negative charge)
Atoms can be combined in various ways to form different types of matter, such as solids, liquids, and gases, and to make up different elements, which are substances that cannot be broken down further by chemical reactions.
Essential Elements to Know for AP Biology:
- Oxygen (O)
- Carbon (C)
- Hydrogen (H)
- Nitrogen (N)
- Calcium (Ca)
- Phosphorus (P)
- Potassium (K)
- Sulfur (S)
- Sodium (Na)
- Chlorine (Cl)
- Magnesium (Mg)
How Elements Build Macromolecules: The six key elements (C, H, O, N, P, S) systematically compose the four major types of biological macromolecules:
- Carbohydrates: Made primarily of C, H, and O in a 1:2:1 ratio (CH₂O)
- Proteins: Composed of C, H, O, N, and S (sulfur in some amino acids)
- Lipids: Built from C, H, O, and P (in phospholipids)
- Nucleic Acids: Contain C, H, O, N, and P (phosphate backbone)
Compounds vs. Elements:
-
Compounds = substances made of two or more elements in a fixed ratio
- Example: Water (H₂O) contains two hydrogens and one oxygen in a fixed ratio
-
Elements = pure substances that cannot be broken down further by chemical reactions
Living systems and the organisms in them require constant exchanges of energy and macromolecules. Exchanging matter is what allows an organism to grow and reproduce. By understanding atoms and molecules, we can understand the basis of the elements of life!
Atoms
An element's properties are retained by the smallest unit of mass, called an atom. The subatomic particles that compose atoms are protons (positive charge), neutrons (neutral/no electrical charge), and electrons (negative charge).
The atomic number of an element is determined by the number of protons in the nucleus. In the figure below, the number six is the atomic number of carbon. The atomic mass number is the sum of the protons and neutrons in the nucleus. The atomic mass number from the figure is 12.011.

Isotopes
Isotopes are two atoms of an element that have a different number of neutrons. Radioactive isotopes are used for processes that include fossil dating and medical imaging. They decay spontaneously and release energy. An example of a radioactive isotope that is used for dating sites, fossils, and artifacts is Carbon-14, or radiocarbon, which has an atomic nucleus containing six protons and eight neutrons.
Electron Shells
An electron's potential energy (location/structure) is called an energy level or electron shell. When electrons absorb energy, they move up or jump an energy level farther away from the nucleus. When electrons release energy, they move closer to the nucleus.
Elemental Building Blocks
Carbon
Carbon is the building block of the major macromolecules/organic molecules: carbohydrates, lipids, proteins, and nucleic acids. It is a major component of compounds and helps form cells in organisms.
Why is carbon such an important biological element? Carbon has the unique ability to form four covalent bonds, which is known as tetra-valence. The goal for all atoms is to be stable, and carbon is a stable element that readily bonds with a variety of other elements. Carbon must find four more electrons to fill its outer shell, giving a total of eight electrons to satisfy the octet rule. The octet rule states that atoms will lose, gain or share electrons to achieve an electron configuration of eight valence electrons. (e.g CH4 methane)
Nitrogen
Nitrogen is a key element used to build proteins. It forms the essential amino group (-NH₂) that is present in every amino acid, the building blocks of proteins. Without nitrogen, proteins cannot be formed.
Nitrogen is a building block in proteins, nucleic acids, amino acids, and enzymes. These molecules play crucial roles in many biological processes, including metabolism, cell division, and DNA replication. Nitrogen is even a component of many hormones, such as adrenaline and insulin.
In addition to its role in the synthesis of biological molecules, nitrogen is also important in the environment. Nitrogen is a key element in the nitrogen cycle, which plays a crucial role in the balance of nutrients in ecosystems. While nitrogen is primarily in the atmosphere as a gas, plants and some microorganisms can convert atmospheric nitrogen into a usable form for other organisms through nitrogen fixation, which is essential for the overall functioning of ecosystems.
Phosphorus
Phosphorus is also a useful element in biology because it is a key component of nucleic acids, certain proteins, and lipids. Beyond its role in DNA and RNA, which are essential components of the genetic material in all living organisms, phosphorus is also involved in biological processes like energy production. It also plays a crucial role in the balance of nutrients in ecosystems.
Functional Groups
Functional Group are accessory elements that give molecules a different structure, therefore, a different function. They can be classified as hydrophobic or hydrophilic based on their charge and polarity characteristics.
- Hydroxyl Group: Hydrogen bonded to Oxygen (OH) attached to the carbon skeleton. (alcohols such as methanol, polar)

- Carbonyl Group: Double bond (sharing of two pairs of valence electrons) between carbon and oxygen. If the carbonyl group is on the end of the carbon skeleton, it is called an aldehyde. If not, then it is a ketone. (polar)

- Carboxyl Group: a combination of carbonyl and hydroxyl where carbon is double-bonded to an oxygen and a hydroxyl. (release H+ into solutions, acidic)

- Amino Group: Nitrogen bonded to two hydrogens and one carbon atom. Amines are organic molecules that have an amino group. (remove H+ from solutions; therefore, basic) Nitrogen is used to build proteins and nucleic acids.

- Phosphate Group: phosphate ion covalently attached to the carbon skeleton. (Lots of energy is used to make nucleic acids and phospholipids; acidic because they release H+ into solutions)

- Sulfhydryl Group: Sulfur bonded to a hydrogen atom. (Polar)

(In the images above, the R represents an unknown part of the molecule that the functional group is attached to)
Elements are the building blocks that make life possible. Carbon, with its amazing ability to form four bonds, is especially important for creating the complex molecules our bodies need. Nitrogen and phosphorus also play key roles in building proteins and DNA. Remember that all living things must constantly exchange matter with their environment to survive and grow. When you understand how these basic elements combine to form different molecules with different functional groups, you begin to see how chemistry creates the foundation for all biology. As you continue in your AP Biology journey, keep these elemental building blocks in mind - they'll help you make sense of more complex biological processes!
Vocabulary
The following words are mentioned explicitly in the College Board Course and Exam Description for this topic.
| Term | Definition |
|---|---|
| carbohydrates | Biological molecules composed of carbon, hydrogen, and oxygen that serve as a primary source of energy and structural support in living organisms. |
| carbon | An element that is the most prevalent component of biological molecules and forms the backbone of all organic compounds. |
| hydrogen | An element that is a prevalent component of biological molecules and is bonded to carbon, oxygen, and nitrogen in macromolecules. |
| lipid | Hydrophobic or amphipathic biological molecules composed primarily of carbon, hydrogen, and oxygen that store energy and form cell membranes. |
| macromolecules | Large, complex molecules composed of many atoms that are essential for life processes, including carbohydrates, proteins, lipids, and nucleic acids. |
| nitrogen | An element used in the building of nucleic acids and proteins as part of amino groups and nitrogenous bases. |
| nucleic acid | Macromolecules composed of nucleotides containing carbon, hydrogen, oxygen, nitrogen, and phosphorus that store and transmit genetic information. |
| oxygen | An element that is a prevalent component of biological molecules and is found in carbohydrates, lipids, proteins, and nucleic acids. |
| phospholipid | Amphipathic molecules with hydrophilic phosphate heads and hydrophobic fatty acid tails that form the basic structure of the cell membrane. |
| phosphorus | An element used in the building of phospholipids and nucleic acids, particularly in phosphate groups. |
| protein | Macromolecules composed of amino acids linked together, containing carbon, hydrogen, oxygen, nitrogen, and often sulfur, that perform diverse functions in cells. |
| sulfur | An element used in the building of proteins, often found in disulfide bonds between amino acids. |
Frequently Asked Questions
What are the main elements that living things are made of?
Most biological molecules are built from a handful of elements. Carbon, hydrogen, and oxygen are the most prevalent—they form the backbones and main atoms of carbohydrates, lipids, proteins, and nucleic acids. Nitrogen is key for amino acids and nucleotides (so proteins and nucleic acids need it). Phosphorus appears in nucleic acids and in phospholipids (phosphate groups), and sulfur is used in some amino acids (e.g., cysteine) and thus in protein structure. Knowing which elements link to which macromolecules helps you predict bonds and functional groups (glycosidic bonds in carbs, peptide bonds in proteins, ester bonds in lipids, phosphate groups in nucleic acids). This is CED Essential Knowledge 1.2.A. For a quick Topic 1.2 review, check the Fiveable study guide (https://library.fiveable.me/ap-biology/unit-1/elements-life/study-guide/kLZ8GN081XmAmZpivYFN). For unit context and extra practice, see Unit 1 (https://library.fiveable.me/ap-biology/unit-1) and the practice bank (https://library.fiveable.me/practice/ap-biology).
Why is carbon so important for life?
Carbon is central to life because its atoms form the backbone of all biological macromolecules (carbohydrates, proteins, lipids, nucleic acids—see CED 1.2.A.1). Carbon is tetravalent (4 valence electrons), so it makes stable covalent bonds with H, O, N, P, and S and can build long chains, branched structures, rings, and double bonds. That structural versatility lets cells make diverse monomers (monosaccharides, amino acids, fatty acids/glycerol, nucleotides) and link them via glycosidic, peptide, ester, and phosphodiester bonds. Carbon’s bonds are stable enough to store information and energy but can be rearranged by enzymes, so organisms can build, break down, and modify molecules as needed. For AP review, focus on how carbon pairs with H and O in carbs and lipids, with N and S in amino acids/proteins, and with P in nucleic acids/phospholipids (CED keywords). For a quick Topic 1.2 study guide, check this Fiveable resource (https://library.fiveable.me/ap-biology/unit-1/elements-life/study-guide/kLZ8GN081XmAmZpivYFN) and use practice problems (https://library.fiveable.me/practice/ap-biology) to solidify examples.
What's the difference between carbohydrates, proteins, lipids, and nucleic acids?
Carbs, proteins, lipids, and nucleic acids are the four biological macromolecules you need to know for Topic 1.2—here’s a quick breakdown: - Carbohydrates: Made of C, H, O (ratio often 1:2:1). Monomers = monosaccharides (glucose). Polysaccharides form by glycosidic bonds via dehydration synthesis. Major roles: short-term energy and structural support (cellulose, glycogen). - Proteins: Built from amino acids (monomers) containing C, H, O, N and sometimes S (in sulfhydryl groups). Amino acids link by peptide bonds. Functions: enzymes, structural, signaling, transport. - Lipids: Mostly C and H with few O; not true polymers. Include fats (triglycerides), phospholipids (contain P), and steroids. Fatty acids + glycerol form ester bonds. Roles: long-term energy storage, membranes (phospholipids), hormones. - Nucleic acids: Polymers of nucleotides (contain C, H, O, N, P). Phosphate groups link sugars (phosphodiester bonds). Store and transmit genetic info (DNA, RNA). For AP exam focus: know monomers, key elements (C, H, O, N, P, S), bond types (peptide, glycosidic, ester, phosphodiester), and dehydration synthesis/hydrolysis. Review the Topic 1.2 study guide (https://library.fiveable.me/ap-biology/unit-1/elements-life/study-guide/kLZ8GN081XmAmZpivYFN) and practice problems (https://library.fiveable.me/practice/ap-biology) for drills.
I'm confused about which elements are used to build which macromolecules - can someone break this down?
Short version: carbon (C), hydrogen (H), and oxygen (O) are the backbone of all four macromolecule groups. Beyond that, remember these extras: - Carbohydrates: C, H, O—monomers are monosaccharides joined by glycosidic bonds (dehydration synthesis). - Proteins: C, H, O, N—built from amino acids linked by peptide bonds; sulfur (S) appears in some amino acid R groups (cysteine, methionine) and forms disulfide bonds. - Lipids (including phospholipids): mostly C, H, O—fatty acids + glycerol linked by ester bonds; phospholipids also contain phosphorus (P) in phosphate groups (polar head). - Nucleic acids (DNA/RNA): C, H, O, N, P—nucleotides (sugar + base + phosphate); phosphate groups (P) link nucleotides through phosphodiester bonds; nitrogen (N) is in the bases. On the AP exam, be ready to ID elements from structures and link them to bonds/functions (CED 1.2.A.1). For a quick review, check the Topic 1.2 study guide (https://library.fiveable.me/ap-biology/unit-1/elements-life/study-guide/kLZ8GN081XmAmZpivYFN) and practice problems (https://library.fiveable.me/practice/ap-biology).
Why do we need sulfur to make proteins?
You need sulfur in proteins because two standard amino acids—cysteine and methionine—contain sulfur in their R groups. Cysteine has a sulfhydryl (–SH) group that can form disulfide bonds (S–S) with another cysteine after dehydration synthesis; those disulfide bridges help stabilize a protein’s tertiary and quaternary structures. Methionine contains a thioether (a sulfur-containing side chain) and is also the usual start codon amino acid in translation. So sulfur isn’t a major bulk element like C, H, or O, but it’s essential for protein structure and function because of these chemical groups. This aligns with the CED essential knowledge (1.2.A.1.i) for Topic 1.2. For a quick review, check the Topic 1.2 study guide (https://library.fiveable.me/ap-biology/unit-1/elements-life/study-guide/kLZ8GN081XmAmZpivYFN) and more unit resources (https://library.fiveable.me/ap-biology/unit-1) or practice questions (https://library.fiveable.me/practice/ap-biology).
What role does phosphorus play in building molecules in our bodies?
Phosphorus shows up in your body mainly as phosphate groups (PO4^3−) that are essential building blocks. On the AP CED this is tied to nucleic acids and phospholipids: nucleotides (the monomers of DNA/RNA) include a phosphate attached to a sugar, and adjacent nucleotides link via phosphodiester bonds to form the sugar-phosphate backbone. In lipids, phosphate makes the polar “head” of phospholipids, creating amphipathic molecules that form bilayers in cell membranes. These phosphate groups are added/removed during dehydration synthesis and hydrolysis reactions, so they’re central to assembling macromolecules and linking subunits. For quick review, see the Topic 1.2 study guide (https://library.fiveable.me/ap-biology/unit-1/elements-life/study-guide/kLZ8GN081XmAmZpivYFN). For more practice on CED-aligned questions, check Unit 1 (https://library.fiveable.me/ap-biology/unit-1) and the practice problem set (https://library.fiveable.me/practice/ap-biology).
How do nitrogen, carbon, hydrogen, and oxygen work together to make nucleic acids?
Carbon, hydrogen, oxygen, and nitrogen each play specific roles when cells build nucleic acids (DNA/RNA). Carbon, hydrogen, and oxygen make up the sugar (deoxyribose or ribose) backbone of each nucleotide; phosphorus (as phosphate) links those sugars into a chain via phosphodiester (ester) bonds formed by dehydration synthesis. Nitrogen is found mainly in the nitrogenous bases (A, T/U, G, C): those N-containing rings give bases their shape and ability to form hydrogen bonds (base pairing), which stores and transmits genetic information. So: nucleotides = sugar (C,H,O) + phosphate (P,O) + nitrogenous base (contains N plus C,H,O); phosphate groups join sugars into the backbone, and nitrogen in bases enables specific H-bonding between complementary bases. For AP review, this maps to LO 1.2.A and the CED keywords (nucleotides, phosphate group, dehydration synthesis). For a quick refresher, see the Topic 1.2 study guide (https://library.fiveable.me/ap-biology/unit-1/elements-life/study-guide/kLZ8GN081XmAmZpivYFN) and try practice questions (https://library.fiveable.me/practice/ap-biology).
What happens if an organism doesn't get enough of these essential elements from its environment?
If an organism can’t get enough essential elements (C, H, O, N, P, S) from its environment, it can’t build key macromolecules—carbohydrates, lipids, proteins, or nucleic acids—so growth, repair, reproduction, and metabolism slow or fail. Short examples: low nitrogen limits amino acids and nucleotides (fewer proteins and nucleic acids); low phosphorus limits ATP, phospholipids, and DNA/RNA; low sulfur affects disulfide bonds in some proteins. Ecologically, a missing element becomes a limiting nutrient and constrains population biomass (AP-style concept often tested in data/graph questions). Organisms may temporarily compensate by reallocating resources or slowing growth, but prolonged shortages cause reduced fitness, developmental defects, or death. For review, see the Topic 1.2 study guide (https://library.fiveable.me/ap-biology/unit-1/elements-life/study-guide/kLZ8GN081XmAmZpivYFN) and the Unit 1 overview (https://library.fiveable.me/ap-biology/unit-1). Practice problems: (https://library.fiveable.me/practice/ap-biology).
Can someone explain why phospholipids need phosphorus but other lipids don't?
Phospholipids need phosphorus because they include a phosphate group in their “head,” while most other lipids (like triglycerides) don’t. In a phospholipid, glycerol is bonded to two fatty acids (hydrophobic tails) and one phosphate-containing group (hydrophilic head). That phosphate group (a PO4) has polar/charged oxygens, so the head is water-loving and the tails are water-fearing—this amphipathic structure is why phospholipids form bilayers in membranes. Other lipids (e.g., triglycerides) are glycerol + three fatty acids and lack the phosphate group, so they’re nonpolar and mainly used for energy/storage, not membranes. This matches the CED point that phosphorus is used for phospholipids and nucleic acids (1.2.A.1.ii). For more review on elements used in macromolecules and practice, check the Topic 1.2 study guide (https://library.fiveable.me/ap-biology/unit-1/elements-life/study-guide/kLZ8GN081XmAmZpivYFN) and try related practice questions (https://library.fiveable.me/practice/ap-biology).
What are the most common elements found in biological molecules and why?
The most common elements in biological molecules are carbon (C), hydrogen (H), and oxygen (O)—they form the backbone of carbohydrates, lipids, proteins and nucleic acids because carbon can form four stable covalent bonds and make large, diverse molecules. Nitrogen (N) is also common—it’s essential in amino acids (proteins) and nucleotides (nucleic acids). Phosphorus (P) is key in phosphate groups found in nucleic acids and phospholipids (membrane structure). Sulfur (S) appears in some amino acids (like cysteine and methionine) and helps form disulfide bonds that stabilize protein structure. These elemental roles match CED 1.2.A.1 (use the keywords: amino acids, nucleotides, phospholipids, sulfhydryl/ phosphate groups). For more concise review tied to the AP scope, see the Topic 1.2 study guide (https://library.fiveable.me/ap-biology/unit-1/elements-life/study-guide/kLZ8GN081XmAmZpivYFN) and try practice questions (https://library.fiveable.me/practice/ap-biology) to prep for how the exam asks about composition and macromolecule building.
How do atoms from the environment get turned into the molecules our bodies need?
Atoms from the environment become the molecules your body needs through digestion, transport, and biosynthesis using the key elements C, H, O, N, P, and S. You eat foods or absorb inorganic ions; digestion and cellular transport break large inputs into atoms or small molecules (glucose, amino acids, fatty acids, phosphate). Cells then rebuild those building blocks into macromolecules via condensation (dehydration synthesis) reactions that form glycosidic bonds (carbs), peptide bonds (proteins from amino acids—note sulfur in some R groups), ester bonds (lipids, including phospholipids with phosphate groups), and phosphodiester bonds in nucleic acids (nitrogen in nucleotides). Enzymes and metabolic pathways channel atoms into specific biomolecules; ATP supplies energy and phosphate groups. This is exactly what Topic 1.2 (Elements of Life) expects you to know for the AP exam: identify which elements are used where and name the bond types. For a focused review, see the Topic 1.2 study guide (https://library.fiveable.me/ap-biology/unit-1/elements-life/study-guide/kLZ8GN081XmAmZpivYFN), the Unit 1 overview (https://library.fiveable.me/ap-biology/unit-1), and practice questions (https://library.fiveable.me/practice/ap-biology).
I don't understand why we need so many different elements - why can't life just use carbon and hydrogen?
Good question—life needs more than carbon and hydrogen because different elements give molecules different chemical tricks. Six elements (C, H, O, N, P, S) are especially important in macromolecules: C/H/O form the backbone of carbs and lipids; N is needed for amino acids and nucleotides; P provides phosphate groups for nucleic acids and phospholipids; S makes disulfide bonds in some proteins. Those extra atoms add charge, polarity, and reactive groups (phosphate = negative/energy transfer; sulfhydryl = can form covalent S–S links) so molecules can store energy, fold correctly, catalyze reactions, and carry information. Metals and other trace elements act as enzyme cofactors or signals too. On the AP exam you should be able to name these elements and link them to macromolecules (CED 1.2.A.1 keywords: Nitrogen, Phosphorus, Sulfur, Phosphate group, Sulfhydryl group). For a quick review, see the Topic 1.2 study guide (https://library.fiveable.me/ap-biology/unit-1/elements-life/study-guide/kLZ8GN081XmAmZpivYFN)—and practice problems are at (https://library.fiveable.me/practice/ap-biology) if you want more examples.
What's the connection between the elements we eat in food and the macromolecules in our cells?
The elements in the food you eat are the raw materials your cells use to build macromolecules. Carbon, hydrogen, and oxygen (the most prevalent) form the backbones of carbohydrates, lipids, proteins, and nucleic acids. Nitrogen is essential for amino acids and nucleotides (so it’s key for proteins and nucleic acids), phosphorus is needed for phosphate groups in nucleic acids and phospholipids, and sulfur is found in some amino acids (disulfide bonds stabilize protein structure). Your body breaks food into monomers (sugars, fatty acids/glycerol, amino acids, nucleotides) and then reassembles them by dehydration synthesis using those same elements and bonds like peptide, glycosidic, and ester bonds. This is exactly what AP CED 1.2.A describes—atoms from the environment build new biological molecules. For a focused review, check the Topic 1.2 study guide (https://library.fiveable.me/ap-biology/unit-1/elements-life/study-guide/kLZ8GN081XmAmZpivYFN), the Unit 1 overview (https://library.fiveable.me/ap-biology/unit-1), and practice questions (https://library.fiveable.me/practice/ap-biology).
Why is it called "elements of life" when there are way more than just these few elements on Earth?
“Elements of life” just means the elements most important for building biological macromolecules—not that they’re the only elements on Earth. AP Topic 1.2 (1.2.A.1) highlights six: carbon, hydrogen, oxygen, nitrogen, sulfur, and phosphorus (CHONPS). Those six make up the backbones and functional groups of carbohydrates, proteins, lipids, nucleic acids, amino acids, and nucleotides, so they're emphasized on the exam. Other elements (like iron, calcium, sodium, potassium) are present and important as trace elements or ions, but they’re not the primary building blocks of macromolecules. For AP Bio you should be able to name CHONPS and explain their roles in macromolecule structure and function (this content appears in Unit 1, which is 8–11% of the exam). For a quick review, see the Topic 1.2 study guide (https://library.fiveable.me/ap-biology/unit-1/elements-life/study-guide/kLZ8GN081XmAmZpivYFN)—and practice problems are at (https://library.fiveable.me/practice/ap-biology).